Cluster: MGYG000002991_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002991
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002991_9 | MGYG000002991_9_14 | 15784 | 18111 | - | 9.A.8.1.6 |
| TC | MGYG000002991_9 | MGYG000002991_9_15 | 18235 | 18456 | - | 9.A.8.1.6 |
| STP | MGYG000002991_9 | MGYG000002991_9_16 | 18496 | 18738 | - | FeoA |
| STP | MGYG000002991_9 | MGYG000002991_9_17 | 18927 | 19175 | - | PTS-HPr |
| TC | MGYG000002991_9 | MGYG000002991_9_18 | 19598 | 21061 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000002991_9 | MGYG000002991_9_19 | 21215 | 21670 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002991_9 | MGYG000002991_9_20 | 21674 | 24682 | - | GH2 |
Gene ID: MGYG000002991_9_14
Type: TC
Location: 15784 - 18111 (-)
Type: TC
Location: 15784 - 18111 (-)
Gene ID: MGYG000002991_9_15
Type: TC
Location: 18235 - 18456 (-)
Type: TC
Location: 18235 - 18456 (-)
Gene ID: MGYG000002991_9_16
Type: STP
Location: 18496 - 18738 (-)
Type: STP
Location: 18496 - 18738 (-)
Gene ID: MGYG000002991_9_17
Type: STP
Location: 18927 - 19175 (-)
Type: STP
Location: 18927 - 19175 (-)
Gene ID: MGYG000002991_9_18
Type: TC
Location: 19598 - 21061 (-)
Type: TC
Location: 19598 - 21061 (-)
Gene ID: MGYG000002991_9_19
Type:
Location: 21215 - 21670 (-)
Type:
Location: 21215 - 21670 (-)
Gene ID: MGYG000002991_9_20
Type: CAZyme
Location: 21674 - 24682 (-)
Type: CAZyme
Location: 21674 - 24682 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900542305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.