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Cluster: MGYG000002978_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002978_5 MGYG000002978_5_20 23481 24407 - CE7
TC MGYG000002978_5 MGYG000002978_5_21 24539 25366 - 3.A.1.5.27
TC MGYG000002978_5 MGYG000002978_5_22 25367 27382 - 3.A.1.5.25
TC MGYG000002978_5 MGYG000002978_5_23 27386 28342 - 3.A.1.5.38
TC MGYG000002978_5 MGYG000002978_5_24 28500 30113 - 3.A.1.5.27
pfam MGYG000002978_5 MGYG000002978_5_25 30478 32418 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC MGYG000002978_5 MGYG000002978_5_26 32425 34107 - 2.A.66.4.4
pfam MGYG000002978_5 MGYG000002978_5_27 34111 34611 - tRNA_edit
pfam MGYG000002978_5 MGYG000002978_5_28 34744 37623 - UvrA_DNA-bind | UvrA_inter
TC MGYG000002978_5 MGYG000002978_5_29 37883 38713 + 3.A.1.132.3
Gene ID: MGYG000002978_5_20
Type: CAZyme
Location: 23481 - 24407 (-)
Gene ID: MGYG000002978_5_21
Type: TC
Location: 24539 - 25366 (-)
Gene ID: MGYG000002978_5_22
Type: TC
Location: 25367 - 27382 (-)
Gene ID: MGYG000002978_5_23
Type: TC
Location: 27386 - 28342 (-)
Gene ID: MGYG000002978_5_24
Type: TC
Location: 28500 - 30113 (-)
Gene ID: MGYG000002978_5_25
Type: pfam
Location: 30478 - 32418 (-)
Gene ID: MGYG000002978_5_26
Type: TC
Location: 32425 - 34107 (-)
Gene ID: MGYG000002978_5_27
Type: pfam
Location: 34111 - 34611 (-)
Gene ID: MGYG000002978_5_28
Type: pfam
Location: 34744 - 37623 (-)
Gene ID: MGYG000002978_5_29
Type: TC
Location: 37883 - 38713 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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