Cluster: MGYG000002970_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002970
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002970_9 | MGYG000002970_9_22 | 22498 | 22971 | + | 4.A.6.1.18 |
| TC | MGYG000002970_9 | MGYG000002970_9_23 | 22981 | 23766 | + | 4.A.6.1.13 |
| TC | MGYG000002970_9 | MGYG000002970_9_24 | 23769 | 24602 | + | 4.A.6.1.13 |
| pfam | MGYG000002970_9 | MGYG000002970_9_25 | 24629 | 25027 | + | EIIA-man |
| CAZyme | MGYG000002970_9 | MGYG000002970_9_26 | 25040 | 26164 | + | GH172 |
Gene ID: MGYG000002970_9_22
Type: TC
Location: 22498 - 22971 (+)
Type: TC
Location: 22498 - 22971 (+)
Gene ID: MGYG000002970_9_23
Type: TC
Location: 22981 - 23766 (+)
Type: TC
Location: 22981 - 23766 (+)
Gene ID: MGYG000002970_9_24
Type: TC
Location: 23769 - 24602 (+)
Type: TC
Location: 23769 - 24602 (+)
Gene ID: MGYG000002970_9_25
Type: pfam
Location: 24629 - 25027 (+)
Type: pfam
Location: 24629 - 25027 (+)
Gene ID: MGYG000002970_9_26
Type: CAZyme
Location: 25040 - 26164 (+)
Type: CAZyme
Location: 25040 - 26164 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900552755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002970_9_22 | vegan > omnivore | 1.05781 | 0.00701 |