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Cluster: MGYG000002970_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002970_65 MGYG000002970_65_4 2926 4095 - CE9
STP MGYG000002970_65 MGYG000002970_65_5 4213 5379 - SIS | SIS
TF MGYG000002970_65 MGYG000002970_65_6 5494 6225 - GntR
TC MGYG000002970_65 MGYG000002970_65_7 6410 7492 - 4.A.6.1.4
TC MGYG000002970_65 MGYG000002970_65_8 7482 8282 - 4.A.6.1.4
TC MGYG000002970_65 MGYG000002970_65_9 8373 8855 - 4.A.6.1.4
pfam MGYG000002970_65 MGYG000002970_65_10 8892 9173 - YajC
TC MGYG000002970_65 MGYG000002970_65_11 9173 9616 - 4.A.6.1.16
Gene ID: MGYG000002970_65_4
Type: CAZyme
Location: 2926 - 4095 (-)
Gene ID: MGYG000002970_65_5
Type: STP
Location: 4213 - 5379 (-)
Gene ID: MGYG000002970_65_6
Type: TF
Location: 5494 - 6225 (-)
Gene ID: MGYG000002970_65_7
Type: TC
Location: 6410 - 7492 (-)
Gene ID: MGYG000002970_65_8
Type: TC
Location: 7482 - 8282 (-)
Gene ID: MGYG000002970_65_9
Type: TC
Location: 8373 - 8855 (-)
Gene ID: MGYG000002970_65_10
Type: pfam
Location: 8892 - 9173 (-)
Gene ID: MGYG000002970_65_11
Type: TC
Location: 9173 - 9616 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002970_65_10 vegan > omnivore 1.02097 0.00701

🧭 Explore Read Mapping of CGC

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