Cluster: MGYG000002969_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002969
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002969_3 | MGYG000002969_3_83 | 90408 | 91622 | - | GH170 | GH170 |
| TC | MGYG000002969_3 | MGYG000002969_3_84 | 91731 | 93089 | - | 4.A.1.2.7 |
| STP | MGYG000002969_3 | MGYG000002969_3_85 | 93101 | 94012 | - | SIS |
| pfam | MGYG000002969_3 | MGYG000002969_3_86 | 94386 | 95654 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| TC | MGYG000002969_3 | MGYG000002969_3_87 | 95854 | 97536 | - | 2.A.49.5.5 |
| TC | MGYG000002969_3 | MGYG000002969_3_88 | 97806 | 98810 | - | 2.A.28.2.4 |
| TC | MGYG000002969_3 | MGYG000002969_3_89 | 99085 | 100098 | - | 2.A.28.2.4 |
| pfam | MGYG000002969_3 | MGYG000002969_3_90 | 100355 | 101023 | + | UPF0029 | DUF1949 |
| TC | MGYG000002969_3 | MGYG000002969_3_91 | 101219 | 102274 | + | 3.A.1.15.11 |
| TC | MGYG000002969_3 | MGYG000002969_3_92 | 102331 | 103041 | + | 3.A.1.15.11 |
| TC | MGYG000002969_3 | MGYG000002969_3_93 | 103215 | 104018 | + | 3.A.1.15.11 |
Gene ID: MGYG000002969_3_83
Type: CAZyme
Location: 90408 - 91622 (-)
Type: CAZyme
Location: 90408 - 91622 (-)
Gene ID: MGYG000002969_3_84
Type: TC
Location: 91731 - 93089 (-)
Type: TC
Location: 91731 - 93089 (-)
Gene ID: MGYG000002969_3_85
Type: STP
Location: 93101 - 94012 (-)
Type: STP
Location: 93101 - 94012 (-)
Gene ID: MGYG000002969_3_86
Type: pfam
Location: 94386 - 95654 (+)
Type: pfam
Location: 94386 - 95654 (+)
Gene ID: MGYG000002969_3_87
Type: TC
Location: 95854 - 97536 (-)
Type: TC
Location: 95854 - 97536 (-)
Gene ID: MGYG000002969_3_88
Type: TC
Location: 97806 - 98810 (-)
Type: TC
Location: 97806 - 98810 (-)
Gene ID: MGYG000002969_3_89
Type: TC
Location: 99085 - 100098 (-)
Type: TC
Location: 99085 - 100098 (-)
Gene ID: MGYG000002969_3_90
Type: pfam
Location: 100355 - 101023 (+)
Type: pfam
Location: 100355 - 101023 (+)
Gene ID: MGYG000002969_3_91
Type: TC
Location: 101219 - 102274 (+)
Type: TC
Location: 101219 - 102274 (+)
Gene ID: MGYG000002969_3_92
Type: TC
Location: 102331 - 103041 (+)
Type: TC
Location: 102331 - 103041 (+)
Gene ID: MGYG000002969_3_93
Type: TC
Location: 103215 - 104018 (+)
Type: TC
Location: 103215 - 104018 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp900544275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.