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Cluster: MGYG000002966_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002966_48 MGYG000002966_48_5 4178 6373 - GH36
TC MGYG000002966_48 MGYG000002966_48_6 6560 7405 - 3.A.1.1.28
TC MGYG000002966_48 MGYG000002966_48_7 7405 8271 - 3.A.1.1.28
TC MGYG000002966_48 MGYG000002966_48_8 8287 9570 - 3.A.1.1.28
TF MGYG000002966_48 MGYG000002966_48_9 9881 10729 + HTH_AraC | HTH_AraC
TF MGYG000002966_48 MGYG000002966_48_10 10787 11416 + 0042546
TC MGYG000002966_48 MGYG000002966_48_11 11506 12570 + 9.A.23.1.1
TF MGYG000002966_48 MGYG000002966_48_12 12662 12964 - Trp_repressor
TC MGYG000002966_48 MGYG000002966_48_13 13188 13859 + 9.B.28.1.2
pfam MGYG000002966_48 MGYG000002966_48_14 13846 14775 + Radical_SAM | Radical_SAM_C
TF MGYG000002966_48 MGYG000002966_48_15 14805 15317 + 0043935
TC MGYG000002966_48 MGYG000002966_48_16 15347 16528 - 3.A.1.2.5
TC MGYG000002966_48 MGYG000002966_48_17 16532 18070 - 3.A.1.2.5
TC MGYG000002966_48 MGYG000002966_48_18 18177 19247 - 3.A.1.2.5
TC MGYG000002966_48 MGYG000002966_48_19 19402 20445 - 3.A.1.2.26
TF MGYG000002966_48 MGYG000002966_48_20 20457 22055 - HTH_AraC | HTH_AraC
TC MGYG000002966_48 MGYG000002966_48_21 22077 23576 - 8.A.59.2.1
Gene ID: MGYG000002966_48_5
Type: CAZyme
Location: 4178 - 6373 (-)
Gene ID: MGYG000002966_48_6
Type: TC
Location: 6560 - 7405 (-)
Gene ID: MGYG000002966_48_7
Type: TC
Location: 7405 - 8271 (-)
Gene ID: MGYG000002966_48_8
Type: TC
Location: 8287 - 9570 (-)
Gene ID: MGYG000002966_48_9
Type: TF
Location: 9881 - 10729 (+)
Gene ID: MGYG000002966_48_10
Type: TF
Location: 10787 - 11416 (+)
Gene ID: MGYG000002966_48_11
Type: TC
Location: 11506 - 12570 (+)
Gene ID: MGYG000002966_48_12
Type: TF
Location: 12662 - 12964 (-)
Gene ID: MGYG000002966_48_13
Type: TC
Location: 13188 - 13859 (+)
Gene ID: MGYG000002966_48_14
Type: pfam
Location: 13846 - 14775 (+)
Gene ID: MGYG000002966_48_15
Type: TF
Location: 14805 - 15317 (+)
Gene ID: MGYG000002966_48_16
Type: TC
Location: 15347 - 16528 (-)
Gene ID: MGYG000002966_48_17
Type: TC
Location: 16532 - 18070 (-)
Gene ID: MGYG000002966_48_18
Type: TC
Location: 18177 - 19247 (-)
Gene ID: MGYG000002966_48_19
Type: TC
Location: 19402 - 20445 (-)
Gene ID: MGYG000002966_48_20
Type: TF
Location: 20457 - 22055 (-)
Gene ID: MGYG000002966_48_21
Type: TC
Location: 22077 - 23576 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002966_48_6 vegan > omnivore 1.32274 0.02284
MGYG000002966_48_6 vegetarian > omnivore 1.00053 0.02779

🧭 Explore Read Mapping of CGC

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