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Cluster: MGYG000002966_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002966_1 MGYG000002966_1_56 53312 55753 - GH2
CAZyme MGYG000002966_1 MGYG000002966_1_57 55766 58087 - GH31_3
TC MGYG000002966_1 MGYG000002966_1_58 58108 58965 - 3.A.1.1.47
TC MGYG000002966_1 MGYG000002966_1_59 58969 59862 - 3.A.1.1.28
NULL(UNKNOWN) MGYG000002966_1 MGYG000002966_1_60 60041 61390 - NULL(UNKNOWN)
[View Structural Homologs]
TF MGYG000002966_1 MGYG000002966_1_61 61454 62464 - LacI
CAZyme MGYG000002966_1 MGYG000002966_1_62 63013 65448 + GH94
Gene ID: MGYG000002966_1_56
Type: CAZyme
Location: 53312 - 55753 (-)
Gene ID: MGYG000002966_1_57
Type: CAZyme
Location: 55766 - 58087 (-)
Gene ID: MGYG000002966_1_58
Type: TC
Location: 58108 - 58965 (-)
Gene ID: MGYG000002966_1_59
Type: TC
Location: 58969 - 59862 (-)
Gene ID: MGYG000002966_1_60
Type:
Location: 60041 - 61390 (-)
Gene ID: MGYG000002966_1_61
Type: TF
Location: 61454 - 62464 (-)
Gene ID: MGYG000002966_1_62
Type: CAZyme
Location: 63013 - 65448 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002966_1_60 vegetarian > omnivore 1.29145 0.02779

🧭 Explore Read Mapping of CGC

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