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Cluster: MGYG000002966_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002966_8 MGYG000002966_8_17 15652 18231 + CBM67 | GH78
STP MGYG000002966_8 MGYG000002966_8_18 18310 18867 - TetR_N
TC MGYG000002966_8 MGYG000002966_8_19 19079 20488 + 2.A.66.1.13
pfam MGYG000002966_8 MGYG000002966_8_20 20547 22085 + DUF5060 | DUF5605
CAZyme MGYG000002966_8 MGYG000002966_8_21 22269 23576 + GH1
TF MGYG000002966_8 MGYG000002966_8_22 23694 24902 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) MGYG000002966_8 MGYG000002966_8_23 24924 25154 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002966_8 MGYG000002966_8_24 25395 27680 + GH2
pfam MGYG000002966_8 MGYG000002966_8_25 27677 29170 + MFS_2
CAZyme MGYG000002966_8 MGYG000002966_8_26 29247 31040 + CBM32 | GH43_28
CAZyme MGYG000002966_8 MGYG000002966_8_27 31098 33710 + GH3
Gene ID: MGYG000002966_8_17
Type: CAZyme
Location: 15652 - 18231 (+)
Gene ID: MGYG000002966_8_18
Type: STP
Location: 18310 - 18867 (-)
Gene ID: MGYG000002966_8_19
Type: TC
Location: 19079 - 20488 (+)
Gene ID: MGYG000002966_8_20
Type: pfam
Location: 20547 - 22085 (+)
Gene ID: MGYG000002966_8_21
Type: CAZyme
Location: 22269 - 23576 (+)
Gene ID: MGYG000002966_8_22
Type: TF
Location: 23694 - 24902 (-)
Gene ID: MGYG000002966_8_23
Type:
Location: 24924 - 25154 (-)
Gene ID: MGYG000002966_8_24
Type: CAZyme
Location: 25395 - 27680 (+)
Gene ID: MGYG000002966_8_25
Type: pfam
Location: 27677 - 29170 (+)
Gene ID: MGYG000002966_8_26
Type: CAZyme
Location: 29247 - 31040 (+)
Gene ID: MGYG000002966_8_27
Type: CAZyme
Location: 31098 - 33710 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002966_8_17 vegetarian > omnivore 1.62315 0.01465
MGYG000002966_8_21 vegetarian > omnivore 1.18463 0.01465
MGYG000002966_8_26 vegetarian > vegan 1.48719 0.04858

🧭 Explore Read Mapping of CGC

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