Cluster: MGYG000002965_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002965
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002965_13 | MGYG000002965_13_16 | 16599 | 17252 | - | 1.C.113.1.3 |
| pfam | MGYG000002965_13 | MGYG000002965_13_17 | 17403 | 17951 | + | DUF1836 |
| pfam | MGYG000002965_13 | MGYG000002965_13_18 | 17978 | 19465 | + | PPK2 | PPK2 |
| CAZyme | MGYG000002965_13 | MGYG000002965_13_19 | 19729 | 20490 | + | GH171 |
Gene ID: MGYG000002965_13_16
Type: TC
Location: 16599 - 17252 (-)
Type: TC
Location: 16599 - 17252 (-)
Gene ID: MGYG000002965_13_17
Type: pfam
Location: 17403 - 17951 (+)
Type: pfam
Location: 17403 - 17951 (+)
Gene ID: MGYG000002965_13_18
Type: pfam
Location: 17978 - 19465 (+)
Type: pfam
Location: 17978 - 19465 (+)
Gene ID: MGYG000002965_13_19
Type: CAZyme
Location: 19729 - 20490 (+)
Type: CAZyme
Location: 19729 - 20490 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Pseudoruminococcus_B
Species
Pseudoruminococcus_B sp900543705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.