Cluster: MGYG000002965_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002965
- CGC Family ID: CGCFAM_01204
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002965_12 | MGYG000002965_12_24 | 22833 | 23756 | + | 3.A.1.131.1 |
| pfam | MGYG000002965_12 | MGYG000002965_12_25 | 23902 | 24534 | + | ABC2_membrane_2 | ABC2_membrane_4 |
| STP | MGYG000002965_12 | MGYG000002965_12_26 | 24599 | 25510 | + | HATPase_c | HisKA |
| CAZyme | MGYG000002965_12 | MGYG000002965_12_27 | 25744 | 26715 | + | GT2 |
Gene ID: MGYG000002965_12_24
Type: TC
Location: 22833 - 23756 (+)
Type: TC
Location: 22833 - 23756 (+)
Gene ID: MGYG000002965_12_25
Type: pfam
Location: 23902 - 24534 (+)
Type: pfam
Location: 23902 - 24534 (+)
Gene ID: MGYG000002965_12_26
Type: STP
Location: 24599 - 25510 (+)
Type: STP
Location: 24599 - 25510 (+)
Gene ID: MGYG000002965_12_27
Type: CAZyme
Location: 25744 - 26715 (+)
Type: CAZyme
Location: 25744 - 26715 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Pseudoruminococcus_B
Species
Pseudoruminococcus_B sp900543705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.