Cluster: MGYG000002965_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002965
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002965_64 | MGYG000002965_64_4 | 2053 | 3003 | - | CE4 |
| pfam | MGYG000002965_64 | MGYG000002965_64_5 | 3205 | 3582 | + | NusG_II |
| TC | MGYG000002965_64 | MGYG000002965_64_6 | 3633 | 4106 | + | 2.A.87.3.2 |
| pfam | MGYG000002965_64 | MGYG000002965_64_7 | 4235 | 4813 | + | SprT-like |
| CAZyme | MGYG000002965_64 | MGYG000002965_64_8 | 4902 | 5981 | + | GT4 |
| pfam | MGYG000002965_64 | MGYG000002965_64_9 | 5978 | 7000 | + | LPG_synthase_TM |
| pfam | MGYG000002965_64 | MGYG000002965_64_10 | 7099 | 8229 | + | TGT |
| TC | MGYG000002965_64 | MGYG000002965_64_11 | 8297 | 8635 | + | 3.A.5.1.1 |
Gene ID: MGYG000002965_64_4
Type: CAZyme
Location: 2053 - 3003 (-)
Type: CAZyme
Location: 2053 - 3003 (-)
Gene ID: MGYG000002965_64_5
Type: pfam
Location: 3205 - 3582 (+)
Type: pfam
Location: 3205 - 3582 (+)
Gene ID: MGYG000002965_64_6
Type: TC
Location: 3633 - 4106 (+)
Type: TC
Location: 3633 - 4106 (+)
Gene ID: MGYG000002965_64_7
Type: pfam
Location: 4235 - 4813 (+)
Type: pfam
Location: 4235 - 4813 (+)
Gene ID: MGYG000002965_64_8
Type: CAZyme
Location: 4902 - 5981 (+)
Type: CAZyme
Location: 4902 - 5981 (+)
Gene ID: MGYG000002965_64_9
Type: pfam
Location: 5978 - 7000 (+)
Type: pfam
Location: 5978 - 7000 (+)
Gene ID: MGYG000002965_64_10
Type: pfam
Location: 7099 - 8229 (+)
Type: pfam
Location: 7099 - 8229 (+)
Gene ID: MGYG000002965_64_11
Type: TC
Location: 8297 - 8635 (+)
Type: TC
Location: 8297 - 8635 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Pseudoruminococcus_B
Species
Pseudoruminococcus_B sp900543705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.