Cluster: MGYG000002965_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002965
- CGC Family ID: CGCFAM_05493
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002965_41 | MGYG000002965_41_12 | 9485 | 9718 | + | 3.D.1.6.3 |
| NULL(UNKNOWN) | MGYG000002965_41 | MGYG000002965_41_13 | 10136 | 10453 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002965_41 | MGYG000002965_41_14 | 10468 | 11907 | + | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| CAZyme | MGYG000002965_41 | MGYG000002965_41_15 | 12187 | 13134 | - | CE4 |
Gene ID: MGYG000002965_41_12
Type: TC
Location: 9485 - 9718 (+)
Type: TC
Location: 9485 - 9718 (+)
Gene ID: MGYG000002965_41_13
Type:
Location: 10136 - 10453 (+)
Type:
Location: 10136 - 10453 (+)
Gene ID: MGYG000002965_41_14
Type: pfam
Location: 10468 - 11907 (+)
Type: pfam
Location: 10468 - 11907 (+)
Gene ID: MGYG000002965_41_15
Type: CAZyme
Location: 12187 - 13134 (-)
Type: CAZyme
Location: 12187 - 13134 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Pseudoruminococcus_B
Species
Pseudoruminococcus_B sp900543705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.