Cluster: MGYG000002965_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002965
- CGC Family ID: CGCFAM_10893
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002965_38 | MGYG000002965_38_6 | 4939 | 5598 | + | 4.F.1.1.7 |
| pfam | MGYG000002965_38 | MGYG000002965_38_7 | 5681 | 6547 | + | DegV |
| NULL(UNKNOWN) | MGYG000002965_38 | MGYG000002965_38_8 | 6786 | 7211 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002965_38 | MGYG000002965_38_9 | 7559 | 8692 | + | GT4 |
Gene ID: MGYG000002965_38_6
Type: TC
Location: 4939 - 5598 (+)
Type: TC
Location: 4939 - 5598 (+)
Gene ID: MGYG000002965_38_7
Type: pfam
Location: 5681 - 6547 (+)
Type: pfam
Location: 5681 - 6547 (+)
Gene ID: MGYG000002965_38_8
Type:
Location: 6786 - 7211 (-)
Type:
Location: 6786 - 7211 (-)
Gene ID: MGYG000002965_38_9
Type: CAZyme
Location: 7559 - 8692 (+)
Type: CAZyme
Location: 7559 - 8692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Pseudoruminococcus_B
Species
Pseudoruminococcus_B sp900543705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.