Cluster: MGYG000002965_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002965
- CGC Family ID: CGCFAM_06620
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002965_29 | MGYG000002965_29_8 | 5785 | 6684 | + | GT2 |
| pfam | MGYG000002965_29 | MGYG000002965_29_9 | 6684 | 7781 | + | DHQS |
| pfam | MGYG000002965_29 | MGYG000002965_29_10 | 7793 | 8569 | + | DeoC |
| TC | MGYG000002965_29 | MGYG000002965_29_11 | 8600 | 10024 | + | 4.C.1.1.4 |
Gene ID: MGYG000002965_29_8
Type: CAZyme
Location: 5785 - 6684 (+)
Type: CAZyme
Location: 5785 - 6684 (+)
Gene ID: MGYG000002965_29_9
Type: pfam
Location: 6684 - 7781 (+)
Type: pfam
Location: 6684 - 7781 (+)
Gene ID: MGYG000002965_29_10
Type: pfam
Location: 7793 - 8569 (+)
Type: pfam
Location: 7793 - 8569 (+)
Gene ID: MGYG000002965_29_11
Type: TC
Location: 8600 - 10024 (+)
Type: TC
Location: 8600 - 10024 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Pseudoruminococcus_B
Species
Pseudoruminococcus_B sp900543705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.