Cluster: MGYG000002963_CGC60
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002963
- CGC Family ID: CGCFAM_10577
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002963_46 | MGYG000002963_46_10 | 9299 | 10435 | - | 3.D.6.1.1 |
| STP | MGYG000002963_46 | MGYG000002963_46_11 | 10474 | 11046 | - | TetR_N |
| TC | MGYG000002963_46 | MGYG000002963_46_12 | 11193 | 12782 | - | 3.A.1.147.6 |
| TC | MGYG000002963_46 | MGYG000002963_46_13 | 12775 | 13488 | - | 3.A.1.147.6 |
| TF | MGYG000002963_46 | MGYG000002963_46_14 | 13564 | 14079 | - | 0044258 |
| pfam | MGYG000002963_46 | MGYG000002963_46_15 | 14358 | 14768 | - | Trns_repr_metal |
| TC | MGYG000002963_46 | MGYG000002963_46_16 | 15110 | 15691 | - | 2.A.51.1.6 |
| CAZyme | MGYG000002963_46 | MGYG000002963_46_17 | 15884 | 17431 | - | CBM91 | GH43_12 |
| pfam | MGYG000002963_46 | MGYG000002963_46_18 | 17579 | 18559 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3 |
| pfam | MGYG000002963_46 | MGYG000002963_46_19 | 18817 | 19236 | - | HIT |
| CAZyme | MGYG000002963_46 | MGYG000002963_46_20 | 19390 | 21549 | - | GH3 |
| CAZyme | MGYG000002963_46 | MGYG000002963_46_21 | 21653 | 23650 | - | GH67 |
| TF | MGYG000002963_46 | MGYG000002963_46_22 | 23790 | 24659 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002963_46 | MGYG000002963_46_23 | 24665 | 26602 | - | CE20 | CE20 |
| CAZyme | MGYG000002963_46 | MGYG000002963_46_24 | 26829 | 27959 | - | GH8 |
| CAZyme | MGYG000002963_46 | MGYG000002963_46_25 | 28021 | 29547 | - | CBM91 | GH43_10 |
Gene ID: MGYG000002963_46_10
Type: TC
Location: 9299 - 10435 (-)
Type: TC
Location: 9299 - 10435 (-)
Gene ID: MGYG000002963_46_11
Type: STP
Location: 10474 - 11046 (-)
Type: STP
Location: 10474 - 11046 (-)
Gene ID: MGYG000002963_46_12
Type: TC
Location: 11193 - 12782 (-)
Type: TC
Location: 11193 - 12782 (-)
Gene ID: MGYG000002963_46_13
Type: TC
Location: 12775 - 13488 (-)
Type: TC
Location: 12775 - 13488 (-)
Gene ID: MGYG000002963_46_14
Type: TF
Location: 13564 - 14079 (-)
Type: TF
Location: 13564 - 14079 (-)
Gene ID: MGYG000002963_46_15
Type: pfam
Location: 14358 - 14768 (-)
Type: pfam
Location: 14358 - 14768 (-)
Gene ID: MGYG000002963_46_16
Type: TC
Location: 15110 - 15691 (-)
Type: TC
Location: 15110 - 15691 (-)
Gene ID: MGYG000002963_46_17
Type: CAZyme
Location: 15884 - 17431 (-)
Type: CAZyme
Location: 15884 - 17431 (-)
Gene ID: MGYG000002963_46_18
Type: pfam
Location: 17579 - 18559 (-)
Type: pfam
Location: 17579 - 18559 (-)
Gene ID: MGYG000002963_46_19
Type: pfam
Location: 18817 - 19236 (-)
Type: pfam
Location: 18817 - 19236 (-)
Gene ID: MGYG000002963_46_20
Type: CAZyme
Location: 19390 - 21549 (-)
Type: CAZyme
Location: 19390 - 21549 (-)
Gene ID: MGYG000002963_46_21
Type: CAZyme
Location: 21653 - 23650 (-)
Type: CAZyme
Location: 21653 - 23650 (-)
Gene ID: MGYG000002963_46_22
Type: TF
Location: 23790 - 24659 (+)
Type: TF
Location: 23790 - 24659 (+)
Gene ID: MGYG000002963_46_23
Type: CAZyme
Location: 24665 - 26602 (-)
Type: CAZyme
Location: 24665 - 26602 (-)
Gene ID: MGYG000002963_46_24
Type: CAZyme
Location: 26829 - 27959 (-)
Type: CAZyme
Location: 26829 - 27959 (-)
Gene ID: MGYG000002963_46_25
Type: CAZyme
Location: 28021 - 29547 (-)
Type: CAZyme
Location: 28021 - 29547 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerosporobacter
Species
Anaerosporobacter sp018372435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.