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Cluster: MGYG000002963_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002963_28 MGYG000002963_28_12 15079 16440 + GH1
TF MGYG000002963_28 MGYG000002963_28_13 16582 17562 - HTH_AraC
pfam MGYG000002963_28 MGYG000002963_28_14 17869 19041 + GlcNAc_2-epim
CAZyme MGYG000002963_28 MGYG000002963_28_15 19031 20206 + GH130_1
CAZyme MGYG000002963_28 MGYG000002963_28_16 20268 21332 + CE2
pfam MGYG000002963_28 MGYG000002963_28_17 21351 23084 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam MGYG000002963_28 MGYG000002963_28_18 23225 23971 - APH
TC MGYG000002963_28 MGYG000002963_28_19 24372 25337 + 1.B.52.2.1
pfam MGYG000002963_28 MGYG000002963_28_20 25719 26720 - Zn_dep_PLPC
TC MGYG000002963_28 MGYG000002963_28_21 27038 27814 + 2.A.79.1.5
pfam MGYG000002963_28 MGYG000002963_28_22 27811 28251 + ThrE | ThrE_2
pfam MGYG000002963_28 MGYG000002963_28_23 28297 28854 + DUF3877
TC MGYG000002963_28 MGYG000002963_28_24 29002 30471 + 1.B.52.2.1
pfam MGYG000002963_28 MGYG000002963_28_25 30485 31093 + CpXC
NULL(UNKNOWN) MGYG000002963_28 MGYG000002963_28_26 31125 31352 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002963_28 MGYG000002963_28_27 31494 32633 + GH105
pfam MGYG000002963_28 MGYG000002963_28_28 32717 32932 - DUF3006
TC MGYG000002963_28 MGYG000002963_28_29 32969 34033 - 3.A.11.1.4
Gene ID: MGYG000002963_28_12
Type: CAZyme
Location: 15079 - 16440 (+)
Gene ID: MGYG000002963_28_13
Type: TF
Location: 16582 - 17562 (-)
Gene ID: MGYG000002963_28_14
Type: pfam
Location: 17869 - 19041 (+)
Gene ID: MGYG000002963_28_15
Type: CAZyme
Location: 19031 - 20206 (+)
Gene ID: MGYG000002963_28_16
Type: CAZyme
Location: 20268 - 21332 (+)
Gene ID: MGYG000002963_28_17
Type: pfam
Location: 21351 - 23084 (+)
Gene ID: MGYG000002963_28_18
Type: pfam
Location: 23225 - 23971 (-)
Gene ID: MGYG000002963_28_19
Type: TC
Location: 24372 - 25337 (+)
Gene ID: MGYG000002963_28_20
Type: pfam
Location: 25719 - 26720 (-)
Gene ID: MGYG000002963_28_21
Type: TC
Location: 27038 - 27814 (+)
Gene ID: MGYG000002963_28_22
Type: pfam
Location: 27811 - 28251 (+)
Gene ID: MGYG000002963_28_23
Type: pfam
Location: 28297 - 28854 (+)
Gene ID: MGYG000002963_28_24
Type: TC
Location: 29002 - 30471 (+)
Gene ID: MGYG000002963_28_25
Type: pfam
Location: 30485 - 31093 (+)
Gene ID: MGYG000002963_28_26
Type:
Location: 31125 - 31352 (+)
Gene ID: MGYG000002963_28_27
Type: CAZyme
Location: 31494 - 32633 (+)
Gene ID: MGYG000002963_28_28
Type: pfam
Location: 32717 - 32932 (-)
Gene ID: MGYG000002963_28_29
Type: TC
Location: 32969 - 34033 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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