Cluster: MGYG000002962_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002962
- CGC Family ID: CGCFAM_00133
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002962_3 | MGYG000002962_3_18 | 31289 | 33367 | - | GH42 |
| STP | MGYG000002962_3 | MGYG000002962_3_19 | 33634 | 35175 | - | SBP_bac_1 |
| TC | MGYG000002962_3 | MGYG000002962_3_20 | 35247 | 36143 | - | 3.A.1.1.29 |
| TC | MGYG000002962_3 | MGYG000002962_3_21 | 36154 | 37149 | - | 3.A.1.1.10 |
| TF | MGYG000002962_3 | MGYG000002962_3_22 | 37383 | 38921 | + | HTH_AraC |
| TC | MGYG000002962_3 | MGYG000002962_3_23 | 38921 | 40720 | + | 8.A.59.2.1 |
Gene ID: MGYG000002962_3_18
Type: CAZyme
Location: 31289 - 33367 (-)
Type: CAZyme
Location: 31289 - 33367 (-)
Gene ID: MGYG000002962_3_19
Type: STP
Location: 33634 - 35175 (-)
Type: STP
Location: 33634 - 35175 (-)
Gene ID: MGYG000002962_3_20
Type: TC
Location: 35247 - 36143 (-)
Type: TC
Location: 35247 - 36143 (-)
Gene ID: MGYG000002962_3_21
Type: TC
Location: 36154 - 37149 (-)
Type: TC
Location: 36154 - 37149 (-)
Gene ID: MGYG000002962_3_22
Type: TF
Location: 37383 - 38921 (+)
Type: TF
Location: 37383 - 38921 (+)
Gene ID: MGYG000002962_3_23
Type: TC
Location: 38921 - 40720 (+)
Type: TC
Location: 38921 - 40720 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900543325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.