Cluster: MGYG000002962_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002962
- CGC Family ID: CGCFAM_06454
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002962_3 | MGYG000002962_3_7 | 9362 | 10240 | - | 1.A.26.1.4 |
| CAZyme | MGYG000002962_3 | MGYG000002962_3_8 | 10758 | 12185 | - | GH32 |
| STP | MGYG000002962_3 | MGYG000002962_3_9 | 12188 | 13159 | - | PfkB |
| CAZyme | MGYG000002962_3 | MGYG000002962_3_10 | 13443 | 20588 | - | CBM51 | CBM51 | CBM51 |
| TF | MGYG000002962_3 | MGYG000002962_3_11 | 21056 | 21721 | - | MarR |
| TC | MGYG000002962_3 | MGYG000002962_3_12 | 21877 | 23256 | - | 4.A.1.2.1 |
Gene ID: MGYG000002962_3_7
Type: TC
Location: 9362 - 10240 (-)
Type: TC
Location: 9362 - 10240 (-)
Gene ID: MGYG000002962_3_8
Type: CAZyme
Location: 10758 - 12185 (-)
Type: CAZyme
Location: 10758 - 12185 (-)
Gene ID: MGYG000002962_3_9
Type: STP
Location: 12188 - 13159 (-)
Type: STP
Location: 12188 - 13159 (-)
Gene ID: MGYG000002962_3_10
Type: CAZyme
Location: 13443 - 20588 (-)
Type: CAZyme
Location: 13443 - 20588 (-)
Gene ID: MGYG000002962_3_11
Type: TF
Location: 21056 - 21721 (-)
Type: TF
Location: 21056 - 21721 (-)
Gene ID: MGYG000002962_3_12
Type: TC
Location: 21877 - 23256 (-)
Type: TC
Location: 21877 - 23256 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900543325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.