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Cluster: MGYG000002962_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002962_35 MGYG000002962_35_16 16681 18291 + GH20
STP MGYG000002962_35 MGYG000002962_35_17 18850 19332 + AsnC_trans_reg
STP MGYG000002962_35 MGYG000002962_35_18 19329 20519 + Aminotran_1_2
CAZyme MGYG000002962_35 MGYG000002962_35_19 20775 22967 + GH36
TC MGYG000002962_35 MGYG000002962_35_20 23173 24537 + 2.A.2.3.3
TF MGYG000002962_35 MGYG000002962_35_21 24558 25415 - HTH_AraC | HTH_AraC
TC MGYG000002962_35 MGYG000002962_35_22 25635 26888 + 3.A.1.1.28
TC MGYG000002962_35 MGYG000002962_35_23 26909 27772 + 3.A.1.1.28
TC MGYG000002962_35 MGYG000002962_35_24 27772 28656 + 3.A.1.1.28
TF MGYG000002962_35 MGYG000002962_35_25 28780 29766 + LacI
CAZyme MGYG000002962_35 MGYG000002962_35_26 29824 30558 - GH13_18
Gene ID: MGYG000002962_35_16
Type: CAZyme
Location: 16681 - 18291 (+)
Gene ID: MGYG000002962_35_17
Type: STP
Location: 18850 - 19332 (+)
Gene ID: MGYG000002962_35_18
Type: STP
Location: 19329 - 20519 (+)
Gene ID: MGYG000002962_35_19
Type: CAZyme
Location: 20775 - 22967 (+)
Gene ID: MGYG000002962_35_20
Type: TC
Location: 23173 - 24537 (+)
Gene ID: MGYG000002962_35_21
Type: TF
Location: 24558 - 25415 (-)
Gene ID: MGYG000002962_35_22
Type: TC
Location: 25635 - 26888 (+)
Gene ID: MGYG000002962_35_23
Type: TC
Location: 26909 - 27772 (+)
Gene ID: MGYG000002962_35_24
Type: TC
Location: 27772 - 28656 (+)
Gene ID: MGYG000002962_35_25
Type: TF
Location: 28780 - 29766 (+)
Gene ID: MGYG000002962_35_26
Type: CAZyme
Location: 29824 - 30558 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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