Cluster: MGYG000002961_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002961
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002961_10 | MGYG000002961_10_29 | 27551 | 33964 | - | GH31_18 |
| TF | MGYG000002961_10 | MGYG000002961_10_30 | 34475 | 34915 | - | MarR |
| NULL(UNKNOWN) | MGYG000002961_10 | MGYG000002961_10_31 | 35020 | 35346 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002961_10 | MGYG000002961_10_32 | 35543 | 36370 | - | 4.A.6.1.6 |
| TC | MGYG000002961_10 | MGYG000002961_10_33 | 36370 | 37227 | - | 4.A.6.1.1 |
| TC | MGYG000002961_10 | MGYG000002961_10_34 | 37299 | 37787 | - | 4.A.6.1.9 |
Gene ID: MGYG000002961_10_29
Type: CAZyme
Location: 27551 - 33964 (-)
Type: CAZyme
Location: 27551 - 33964 (-)
Gene ID: MGYG000002961_10_30
Type: TF
Location: 34475 - 34915 (-)
Type: TF
Location: 34475 - 34915 (-)
Gene ID: MGYG000002961_10_31
Type:
Location: 35020 - 35346 (-)
Type:
Location: 35020 - 35346 (-)
Gene ID: MGYG000002961_10_32
Type: TC
Location: 35543 - 36370 (-)
Type: TC
Location: 35543 - 36370 (-)
Gene ID: MGYG000002961_10_33
Type: TC
Location: 36370 - 37227 (-)
Type: TC
Location: 36370 - 37227 (-)
Gene ID: MGYG000002961_10_34
Type: TC
Location: 37299 - 37787 (-)
Type: TC
Location: 37299 - 37787 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900542275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002961_10_29 | vegetarian > omnivore | 1.41731 | 0.04137 |
| MGYG000002961_10_29 | vegetarian > vegan | 2.07589 | 0.01560 |