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Cluster: MGYG000002961_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002961_1 MGYG000002961_1_66 80678 81847 - CE9
STP MGYG000002961_1 MGYG000002961_1_67 81967 83133 - SIS | SIS
TF MGYG000002961_1 MGYG000002961_1_68 83248 83979 - GntR
TC MGYG000002961_1 MGYG000002961_1_69 84165 85247 - 4.A.6.1.4
TC MGYG000002961_1 MGYG000002961_1_70 85237 86037 - 4.A.6.1.4
TC MGYG000002961_1 MGYG000002961_1_71 86128 86610 - 4.A.6.1.4
pfam MGYG000002961_1 MGYG000002961_1_72 86647 86928 - YajC
TC MGYG000002961_1 MGYG000002961_1_73 86928 87371 - 4.A.6.1.16
Gene ID: MGYG000002961_1_66
Type: CAZyme
Location: 80678 - 81847 (-)
Gene ID: MGYG000002961_1_67
Type: STP
Location: 81967 - 83133 (-)
Gene ID: MGYG000002961_1_68
Type: TF
Location: 83248 - 83979 (-)
Gene ID: MGYG000002961_1_69
Type: TC
Location: 84165 - 85247 (-)
Gene ID: MGYG000002961_1_70
Type: TC
Location: 85237 - 86037 (-)
Gene ID: MGYG000002961_1_71
Type: TC
Location: 86128 - 86610 (-)
Gene ID: MGYG000002961_1_72
Type: pfam
Location: 86647 - 86928 (-)
Gene ID: MGYG000002961_1_73
Type: TC
Location: 86928 - 87371 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002961_1_72 vegan > omnivore 1.07819 0.00566

🧭 Explore Read Mapping of CGC

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