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Cluster: MGYG000002958_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002958_3 MGYG000002958_3_35 37114 38535 - GH1
TC MGYG000002958_3 MGYG000002958_3_36 38611 40389 - 4.A.3.1.1
TF MGYG000002958_3 MGYG000002958_3_37 40673 41674 + LacI
TC MGYG000002958_3 MGYG000002958_3_38 42008 43768 - 4.A.3.1.1
CAZyme MGYG000002958_3 MGYG000002958_3_39 43945 45387 - GH1
TF MGYG000002958_3 MGYG000002958_3_40 45729 46766 + LacI
CAZyme MGYG000002958_3 MGYG000002958_3_41 47046 48485 - GH1
TC MGYG000002958_3 MGYG000002958_3_42 48552 50327 - 4.A.3.1.1
TF MGYG000002958_3 MGYG000002958_3_43 50685 51689 + LacI
TC MGYG000002958_3 MGYG000002958_3_44 51904 52242 + 4.A.3.1.2
Gene ID: MGYG000002958_3_35
Type: CAZyme
Location: 37114 - 38535 (-)
Gene ID: MGYG000002958_3_36
Type: TC
Location: 38611 - 40389 (-)
Gene ID: MGYG000002958_3_37
Type: TF
Location: 40673 - 41674 (+)
Gene ID: MGYG000002958_3_38
Type: TC
Location: 42008 - 43768 (-)
Gene ID: MGYG000002958_3_39
Type: CAZyme
Location: 43945 - 45387 (-)
Gene ID: MGYG000002958_3_40
Type: TF
Location: 45729 - 46766 (+)
Gene ID: MGYG000002958_3_41
Type: CAZyme
Location: 47046 - 48485 (-)
Gene ID: MGYG000002958_3_42
Type: TC
Location: 48552 - 50327 (-)
Gene ID: MGYG000002958_3_43
Type: TF
Location: 50685 - 51689 (+)
Gene ID: MGYG000002958_3_44
Type: TC
Location: 51904 - 52242 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002958_3_40 vegetarian > omnivore 1.07132 0.01548

🧭 Explore Read Mapping of CGC

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