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Cluster: MGYG000002958_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002958_22 MGYG000002958_22_3 2445 2933 + 4.A.6.1.16
TC MGYG000002958_22 MGYG000002958_22_4 2949 3722 + 4.A.6.1.13
TC MGYG000002958_22 MGYG000002958_22_5 3715 4575 + 4.A.6.1.13
pfam MGYG000002958_22 MGYG000002958_22_6 4609 5013 + EIIA-man
CAZyme MGYG000002958_22 MGYG000002958_22_7 5043 6479 + GH32
pfam MGYG000002958_22 MGYG000002958_22_8 7028 9781 + Sigma54_activat | PRD | EIIA-man
TF MGYG000002958_22 MGYG000002958_22_9 10036 10770 + GntR
TC MGYG000002958_22 MGYG000002958_22_10 10968 12431 + 2.A.118.1.2
Gene ID: MGYG000002958_22_3
Type: TC
Location: 2445 - 2933 (+)
Gene ID: MGYG000002958_22_4
Type: TC
Location: 2949 - 3722 (+)
Gene ID: MGYG000002958_22_5
Type: TC
Location: 3715 - 4575 (+)
Gene ID: MGYG000002958_22_6
Type: pfam
Location: 4609 - 5013 (+)
Gene ID: MGYG000002958_22_7
Type: CAZyme
Location: 5043 - 6479 (+)
Gene ID: MGYG000002958_22_8
Type: pfam
Location: 7028 - 9781 (+)
Gene ID: MGYG000002958_22_9
Type: TF
Location: 10036 - 10770 (+)
Gene ID: MGYG000002958_22_10
Type: TC
Location: 10968 - 12431 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002958_22_9 vegan > omnivore 1.60706 0.02258

🧭 Explore Read Mapping of CGC

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