Cluster: MGYG000002949_CGC55
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002949
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002949_64 | MGYG000002949_64_4 | 5005 | 7305 | + | CBM48 | GH13_9 |
| NULL(UNKNOWN) | MGYG000002949_64 | MGYG000002949_64_5 | 7535 | 7759 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002949_64 | MGYG000002949_64_6 | 7901 | 9109 | + | 3.A.1.11.1 |
| TC | MGYG000002949_64 | MGYG000002949_64_7 | 9096 | 9959 | + | 3.A.1.11.1 |
| TC | MGYG000002949_64 | MGYG000002949_64_8 | 9956 | 10729 | + | 3.A.1.11.1 |
| TC | MGYG000002949_64 | MGYG000002949_64_9 | 10828 | 11874 | + | 3.A.1.11.8 |
| TC | MGYG000002949_64 | MGYG000002949_64_10 | 11874 | 12689 | + | 3.A.1.11.1 |
| TC | MGYG000002949_64 | MGYG000002949_64_11 | 12701 | 14545 | + | 3.A.1.11.7 |
| TC | MGYG000002949_64 | MGYG000002949_64_12 | 14635 | 15669 | + | 3.A.1.11.1 |
| TC | MGYG000002949_64 | MGYG000002949_64_13 | 15695 | 17329 | + | 8.A.7.1.1 |
Gene ID: MGYG000002949_64_4
Type: CAZyme
Location: 5005 - 7305 (+)
Type: CAZyme
Location: 5005 - 7305 (+)
Gene ID: MGYG000002949_64_5
Type:
Location: 7535 - 7759 (+)
Type:
Location: 7535 - 7759 (+)
Gene ID: MGYG000002949_64_6
Type: TC
Location: 7901 - 9109 (+)
Type: TC
Location: 7901 - 9109 (+)
Gene ID: MGYG000002949_64_7
Type: TC
Location: 9096 - 9959 (+)
Type: TC
Location: 9096 - 9959 (+)
Gene ID: MGYG000002949_64_8
Type: TC
Location: 9956 - 10729 (+)
Type: TC
Location: 9956 - 10729 (+)
Gene ID: MGYG000002949_64_9
Type: TC
Location: 10828 - 11874 (+)
Type: TC
Location: 10828 - 11874 (+)
Gene ID: MGYG000002949_64_10
Type: TC
Location: 11874 - 12689 (+)
Type: TC
Location: 11874 - 12689 (+)
Gene ID: MGYG000002949_64_11
Type: TC
Location: 12701 - 14545 (+)
Type: TC
Location: 12701 - 14545 (+)
Gene ID: MGYG000002949_64_12
Type: TC
Location: 14635 - 15669 (+)
Type: TC
Location: 14635 - 15669 (+)
Gene ID: MGYG000002949_64_13
Type: TC
Location: 15695 - 17329 (+)
Type: TC
Location: 15695 - 17329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS1251
Species
UMGS1251 sp900549995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002949_64_4 | vegan > omnivore | 1.30756 | 0.03330 |
| MGYG000002949_64_7 | vegan > omnivore | 1.02801 | 0.03330 |
| MGYG000002949_64_8 | vegan > omnivore | 1.07274 | 0.03330 |
| MGYG000002949_64_10 | vegan > omnivore | 1.25826 | 0.03330 |
| MGYG000002949_64_13 | vegan > omnivore | 1.27361 | 0.03330 |