Cluster: MGYG000002949_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002949
- CGC Family ID: CGCFAM_01548
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002949_1 | MGYG000002949_1_108 | 129413 | 130189 | + | 3.A.1.103.6 |
| TC | MGYG000002949_1 | MGYG000002949_1_109 | 130198 | 130932 | + | 3.A.1.103.1 |
| CAZyme | MGYG000002949_1 | MGYG000002949_1_110 | 130971 | 135266 | + | GH73 |
| pfam | MGYG000002949_1 | MGYG000002949_1_111 | 135341 | 136048 | + | Germane |
| CAZyme | MGYG000002949_1 | MGYG000002949_1_112 | 136132 | 137340 | - | GT2 |
| pfam | MGYG000002949_1 | MGYG000002949_1_113 | 137478 | 139307 | + | RgpF |
| pfam | MGYG000002949_1 | MGYG000002949_1_114 | 139375 | 141294 | + | RgpF |
| CAZyme | MGYG000002949_1 | MGYG000002949_1_115 | 141347 | 142327 | - | GT2 |
| TC | MGYG000002949_1 | MGYG000002949_1_116 | 142687 | 144090 | + | 9.B.18.1.1 |
| pfam | MGYG000002949_1 | MGYG000002949_1_117 | 144196 | 145398 | + | LytR_cpsA_psr |
| NULL(UNKNOWN) | MGYG000002949_1 | MGYG000002949_1_118 | 145416 | 146771 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002949_1 | MGYG000002949_1_119 | 146749 | 147690 | + | GT2 |
Gene ID: MGYG000002949_1_108
Type: TC
Location: 129413 - 130189 (+)
Type: TC
Location: 129413 - 130189 (+)
Gene ID: MGYG000002949_1_109
Type: TC
Location: 130198 - 130932 (+)
Type: TC
Location: 130198 - 130932 (+)
Gene ID: MGYG000002949_1_110
Type: CAZyme
Location: 130971 - 135266 (+)
Type: CAZyme
Location: 130971 - 135266 (+)
Gene ID: MGYG000002949_1_111
Type: pfam
Location: 135341 - 136048 (+)
Type: pfam
Location: 135341 - 136048 (+)
Gene ID: MGYG000002949_1_112
Type: CAZyme
Location: 136132 - 137340 (-)
Type: CAZyme
Location: 136132 - 137340 (-)
Gene ID: MGYG000002949_1_113
Type: pfam
Location: 137478 - 139307 (+)
Type: pfam
Location: 137478 - 139307 (+)
Gene ID: MGYG000002949_1_114
Type: pfam
Location: 139375 - 141294 (+)
Type: pfam
Location: 139375 - 141294 (+)
Gene ID: MGYG000002949_1_115
Type: CAZyme
Location: 141347 - 142327 (-)
Type: CAZyme
Location: 141347 - 142327 (-)
Gene ID: MGYG000002949_1_116
Type: TC
Location: 142687 - 144090 (+)
Type: TC
Location: 142687 - 144090 (+)
Gene ID: MGYG000002949_1_117
Type: pfam
Location: 144196 - 145398 (+)
Type: pfam
Location: 144196 - 145398 (+)
Gene ID: MGYG000002949_1_118
Type:
Location: 145416 - 146771 (+)
Type:
Location: 145416 - 146771 (+)
Gene ID: MGYG000002949_1_119
Type: CAZyme
Location: 146749 - 147690 (+)
Type: CAZyme
Location: 146749 - 147690 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS1251
Species
UMGS1251 sp900549995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.