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Cluster: MGYG000002949_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002949_5 MGYG000002949_5_29 30052 31356 - 2.A.40.7.4
TF MGYG000002949_5 MGYG000002949_5_30 31486 32406 + HTH_1
CAZyme MGYG000002949_5 MGYG000002949_5_31 32481 33947 - GH4
TF MGYG000002949_5 MGYG000002949_5_32 34111 34995 + HTH_AraC | HTH_AraC
TC MGYG000002949_5 MGYG000002949_5_33 35222 36379 - 3.A.4.1.2
NULL(UNKNOWN) MGYG000002949_5 MGYG000002949_5_34 36406 36642 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002949_5 MGYG000002949_5_35 36670 37830 - 3.A.4.1.2
TF MGYG000002949_5 MGYG000002949_5_36 37921 38418 - MarR
TC MGYG000002949_5 MGYG000002949_5_37 38811 40169 + 2.A.66.1.33
Gene ID: MGYG000002949_5_29
Type: TC
Location: 30052 - 31356 (-)
Gene ID: MGYG000002949_5_30
Type: TF
Location: 31486 - 32406 (+)
Gene ID: MGYG000002949_5_31
Type: CAZyme
Location: 32481 - 33947 (-)
Gene ID: MGYG000002949_5_32
Type: TF
Location: 34111 - 34995 (+)
Gene ID: MGYG000002949_5_33
Type: TC
Location: 35222 - 36379 (-)
Gene ID: MGYG000002949_5_34
Type:
Location: 36406 - 36642 (-)
Gene ID: MGYG000002949_5_35
Type: TC
Location: 36670 - 37830 (-)
Gene ID: MGYG000002949_5_36
Type: TF
Location: 37921 - 38418 (-)
Gene ID: MGYG000002949_5_37
Type: TC
Location: 38811 - 40169 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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