Cluster: MGYG000002944_CGC9
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002944
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002944_8 | MGYG000002944_8_44 | 53565 | 54692 | + | 3.A.1.2.11 |
| TC | MGYG000002944_8 | MGYG000002944_8_45 | 54843 | 56351 | + | 3.A.1.2.20 |
| TC | MGYG000002944_8 | MGYG000002944_8_46 | 56348 | 57334 | + | 3.A.1.2.1 |
| TC | MGYG000002944_8 | MGYG000002944_8_47 | 57324 | 58277 | + | 3.A.1.2.11 |
| pfam | MGYG000002944_8 | MGYG000002944_8_48 | 58291 | 59172 | + | AP_endonuc_2 |
| CAZyme | MGYG000002944_8 | MGYG000002944_8_49 | 59192 | 60211 | + | GH177 |
| pfam | MGYG000002944_8 | MGYG000002944_8_50 | 60283 | 60711 | - | MaoC_dehydratas | FAS1_DH_region |
| sulfatase | MGYG000002944_8 | MGYG000002944_8_51 | 60726 | 61496 | - | S1_8 |
| TC | MGYG000002944_8 | MGYG000002944_8_52 | 61535 | 62827 | - | 2.A.56.1.4 |
| pfam | MGYG000002944_8 | MGYG000002944_8_53 | 62827 | 63345 | - | DctQ |
| TC | MGYG000002944_8 | MGYG000002944_8_54 | 63442 | 64485 | - | 2.A.56.1.6 |
Gene ID: MGYG000002944_8_44
Type: TC
Location: 53565 - 54692 (+)
Type: TC
Location: 53565 - 54692 (+)
Gene ID: MGYG000002944_8_45
Type: TC
Location: 54843 - 56351 (+)
Type: TC
Location: 54843 - 56351 (+)
Gene ID: MGYG000002944_8_46
Type: TC
Location: 56348 - 57334 (+)
Type: TC
Location: 56348 - 57334 (+)
Gene ID: MGYG000002944_8_47
Type: TC
Location: 57324 - 58277 (+)
Type: TC
Location: 57324 - 58277 (+)
Gene ID: MGYG000002944_8_48
Type: pfam
Location: 58291 - 59172 (+)
Type: pfam
Location: 58291 - 59172 (+)
Gene ID: MGYG000002944_8_49
Type: CAZyme
Location: 59192 - 60211 (+)
Type: CAZyme
Location: 59192 - 60211 (+)
Gene ID: MGYG000002944_8_50
Type: pfam
Location: 60283 - 60711 (-)
Type: pfam
Location: 60283 - 60711 (-)
Gene ID: MGYG000002944_8_51
Type: sulfatase
Location: 60726 - 61496 (-)
Type: sulfatase
Location: 60726 - 61496 (-)
Gene ID: MGYG000002944_8_52
Type: TC
Location: 61535 - 62827 (-)
Type: TC
Location: 61535 - 62827 (-)
Gene ID: MGYG000002944_8_53
Type: pfam
Location: 62827 - 63345 (-)
Type: pfam
Location: 62827 - 63345 (-)
Gene ID: MGYG000002944_8_54
Type: TC
Location: 63442 - 64485 (-)
Type: TC
Location: 63442 - 64485 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vermiculatibacterium
Species
Vermiculatibacterium sp900543935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.