Cluster: MGYG000002944_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002944
- CGC Family ID: CGCFAM_10894
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002944_6 | MGYG000002944_6_30 | 30265 | 31023 | + | 3.A.1.134.6 |
| TC | MGYG000002944_6 | MGYG000002944_6_31 | 30980 | 32953 | + | 3.A.1.134.12 |
| pfam | MGYG000002944_6 | MGYG000002944_6_32 | 33008 | 33655 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| TC | MGYG000002944_6 | MGYG000002944_6_33 | 33763 | 34698 | - | 2.A.20.1.6 |
| NULL(UNKNOWN) | MGYG000002944_6 | MGYG000002944_6_34 | 34756 | 35397 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002944_6 | MGYG000002944_6_35 | 35426 | 36511 | - | GT4 |
| CAZyme | MGYG000002944_6 | MGYG000002944_6_36 | 36508 | 38748 | - | GT4 |
Gene ID: MGYG000002944_6_30
Type: TC
Location: 30265 - 31023 (+)
Type: TC
Location: 30265 - 31023 (+)
Gene ID: MGYG000002944_6_31
Type: TC
Location: 30980 - 32953 (+)
Type: TC
Location: 30980 - 32953 (+)
Gene ID: MGYG000002944_6_32
Type: pfam
Location: 33008 - 33655 (-)
Type: pfam
Location: 33008 - 33655 (-)
Gene ID: MGYG000002944_6_33
Type: TC
Location: 33763 - 34698 (-)
Type: TC
Location: 33763 - 34698 (-)
Gene ID: MGYG000002944_6_34
Type:
Location: 34756 - 35397 (-)
Type:
Location: 34756 - 35397 (-)
Gene ID: MGYG000002944_6_35
Type: CAZyme
Location: 35426 - 36511 (-)
Type: CAZyme
Location: 35426 - 36511 (-)
Gene ID: MGYG000002944_6_36
Type: CAZyme
Location: 36508 - 38748 (-)
Type: CAZyme
Location: 36508 - 38748 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vermiculatibacterium
Species
Vermiculatibacterium sp900543935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.