Cluster: MGYG000002944_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002944
- CGC Family ID: CGCFAM_00804
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002944_50 | MGYG000002944_50_1 | 84 | 1082 | - | 3.A.1.2.17 |
| TC | MGYG000002944_50 | MGYG000002944_50_2 | 1079 | 2182 | - | 3.A.1.2.10 |
| TC | MGYG000002944_50 | MGYG000002944_50_3 | 2179 | 3762 | - | 3.A.1.2.17 |
| pfam | MGYG000002944_50 | MGYG000002944_50_4 | 3946 | 5190 | - | Bmp |
| STP | MGYG000002944_50 | MGYG000002944_50_5 | 5590 | 6165 | - | Pribosyltran |
| CAZyme | MGYG000002944_50 | MGYG000002944_50_6 | 6376 | 8001 | + | GH18 |
| TC | MGYG000002944_50 | MGYG000002944_50_7 | 8341 | 9198 | + | 2.A.115.1.5 |
Gene ID: MGYG000002944_50_1
Type: TC
Location: 84 - 1082 (-)
Type: TC
Location: 84 - 1082 (-)
Gene ID: MGYG000002944_50_2
Type: TC
Location: 1079 - 2182 (-)
Type: TC
Location: 1079 - 2182 (-)
Gene ID: MGYG000002944_50_3
Type: TC
Location: 2179 - 3762 (-)
Type: TC
Location: 2179 - 3762 (-)
Gene ID: MGYG000002944_50_4
Type: pfam
Location: 3946 - 5190 (-)
Type: pfam
Location: 3946 - 5190 (-)
Gene ID: MGYG000002944_50_5
Type: STP
Location: 5590 - 6165 (-)
Type: STP
Location: 5590 - 6165 (-)
Gene ID: MGYG000002944_50_6
Type: CAZyme
Location: 6376 - 8001 (+)
Type: CAZyme
Location: 6376 - 8001 (+)
Gene ID: MGYG000002944_50_7
Type: TC
Location: 8341 - 9198 (+)
Type: TC
Location: 8341 - 9198 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vermiculatibacterium
Species
Vermiculatibacterium sp900543935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.