Cluster: MGYG000002944_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: MGYG000002944
- CGC Family ID: CGCFAM_00010
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002944_33 | MGYG000002944_33_1 | 62 | 913 | + | 3.A.1.1.45 |
| TC | MGYG000002944_33 | MGYG000002944_33_2 | 913 | 1785 | + | 3.A.1.1.45 |
| TF | MGYG000002944_33 | MGYG000002944_33_3 | 1791 | 2819 | + | LacI |
| TC | MGYG000002944_33 | MGYG000002944_33_4 | 2833 | 3924 | + | 3.A.1.1.26 |
| STP | MGYG000002944_33 | MGYG000002944_33_5 | 3938 | 4162 | + | PTS-HPr |
| CAZyme | MGYG000002944_33 | MGYG000002944_33_6 | 4193 | 5662 | + | GH77 |
Gene ID: MGYG000002944_33_1
Type: TC
Location: 62 - 913 (+)
Type: TC
Location: 62 - 913 (+)
Gene ID: MGYG000002944_33_2
Type: TC
Location: 913 - 1785 (+)
Type: TC
Location: 913 - 1785 (+)
Gene ID: MGYG000002944_33_3
Type: TF
Location: 1791 - 2819 (+)
Type: TF
Location: 1791 - 2819 (+)
Gene ID: MGYG000002944_33_4
Type: TC
Location: 2833 - 3924 (+)
Type: TC
Location: 2833 - 3924 (+)
Gene ID: MGYG000002944_33_5
Type: STP
Location: 3938 - 4162 (+)
Type: STP
Location: 3938 - 4162 (+)
Gene ID: MGYG000002944_33_6
Type: CAZyme
Location: 4193 - 5662 (+)
Type: CAZyme
Location: 4193 - 5662 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vermiculatibacterium
Species
Vermiculatibacterium sp900543935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.