Cluster: MGYG000002943_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002943
- CGC Family ID: CGCFAM_04287
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002943_5 | MGYG000002943_5_17 | 19701 | 20975 | + | GT4 |
| CAZyme | MGYG000002943_5 | MGYG000002943_5_18 | 20968 | 22698 | + | GT4 |
| TC | MGYG000002943_5 | MGYG000002943_5_19 | 22695 | 23609 | + | 3.A.1.103.2 |
| TC | MGYG000002943_5 | MGYG000002943_5_20 | 23596 | 24633 | + | 3.A.1.104.1 |
| pfam | MGYG000002943_5 | MGYG000002943_5_21 | 24636 | 25412 | + | DUF6270 |
| CAZyme | MGYG000002943_5 | MGYG000002943_5_22 | 25464 | 26708 | - | GT2 |
| NULL(UNKNOWN) | MGYG000002943_5 | MGYG000002943_5_23 | 26708 | 29113 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002943_5 | MGYG000002943_5_24 | 29110 | 31047 | - | GT2 |
| pfam | MGYG000002943_5 | MGYG000002943_5_25 | 31032 | 32876 | - | Glyco_transf_61 |
| CAZyme | MGYG000002943_5 | MGYG000002943_5_26 | 32873 | 36862 | - | GT4 |
| pfam | MGYG000002943_5 | MGYG000002943_5_27 | 37003 | 37395 | - | CTP_transf_like |
| CAZyme | MGYG000002943_5 | MGYG000002943_5_28 | 37660 | 40869 | - | GT2 |
Gene ID: MGYG000002943_5_17
Type: CAZyme
Location: 19701 - 20975 (+)
Type: CAZyme
Location: 19701 - 20975 (+)
Gene ID: MGYG000002943_5_18
Type: CAZyme
Location: 20968 - 22698 (+)
Type: CAZyme
Location: 20968 - 22698 (+)
Gene ID: MGYG000002943_5_19
Type: TC
Location: 22695 - 23609 (+)
Type: TC
Location: 22695 - 23609 (+)
Gene ID: MGYG000002943_5_20
Type: TC
Location: 23596 - 24633 (+)
Type: TC
Location: 23596 - 24633 (+)
Gene ID: MGYG000002943_5_21
Type: pfam
Location: 24636 - 25412 (+)
Type: pfam
Location: 24636 - 25412 (+)
Gene ID: MGYG000002943_5_22
Type: CAZyme
Location: 25464 - 26708 (-)
Type: CAZyme
Location: 25464 - 26708 (-)
Gene ID: MGYG000002943_5_23
Type:
Location: 26708 - 29113 (-)
Type:
Location: 26708 - 29113 (-)
Gene ID: MGYG000002943_5_24
Type: CAZyme
Location: 29110 - 31047 (-)
Type: CAZyme
Location: 29110 - 31047 (-)
Gene ID: MGYG000002943_5_25
Type: pfam
Location: 31032 - 32876 (-)
Type: pfam
Location: 31032 - 32876 (-)
Gene ID: MGYG000002943_5_26
Type: CAZyme
Location: 32873 - 36862 (-)
Type: CAZyme
Location: 32873 - 36862 (-)
Gene ID: MGYG000002943_5_27
Type: pfam
Location: 37003 - 37395 (-)
Type: pfam
Location: 37003 - 37395 (-)
Gene ID: MGYG000002943_5_28
Type: CAZyme
Location: 37660 - 40869 (-)
Type: CAZyme
Location: 37660 - 40869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinomyces
Species
Actinomyces sp915069725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.