Cluster: MGYG000002932_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002932
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002932_10 | MGYG000002932_10_18 | 22835 | 24073 | - | GH105 |
| pfam | MGYG000002932_10 | MGYG000002932_10_19 | 24181 | 24849 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | MGYG000002932_10 | MGYG000002932_10_20 | 24919 | 27084 | - | CE19 | CE8 |
| peptidase | MGYG000002932_10 | MGYG000002932_10_21 | 27081 | 27890 | - | S09.UPW |
| CAZyme | MGYG000002932_10 | MGYG000002932_10_22 | 27995 | 29590 | - | GH28 |
| TC | MGYG000002932_10 | MGYG000002932_10_23 | 29706 | 31265 | - | 2.A.2.5.1 |
Gene ID: MGYG000002932_10_18
Type: CAZyme
Location: 22835 - 24073 (-)
Type: CAZyme
Location: 22835 - 24073 (-)
Gene ID: MGYG000002932_10_19
Type: pfam
Location: 24181 - 24849 (-)
Type: pfam
Location: 24181 - 24849 (-)
Gene ID: MGYG000002932_10_20
Type: CAZyme
Location: 24919 - 27084 (-)
Type: CAZyme
Location: 24919 - 27084 (-)
Gene ID: MGYG000002932_10_21
Type: peptidase
Location: 27081 - 27890 (-)
Type: peptidase
Location: 27081 - 27890 (-)
Gene ID: MGYG000002932_10_22
Type: CAZyme
Location: 27995 - 29590 (-)
Type: CAZyme
Location: 27995 - 29590 (-)
Gene ID: MGYG000002932_10_23
Type: TC
Location: 29706 - 31265 (-)
Type: TC
Location: 29706 - 31265 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002932_10_18 | vegan > omnivore | 1.01608 | 0.00629 |