Cluster: MGYG000002924_CGC5
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002924
- CGC Family ID: CGCFAM_03254
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002924_11 | MGYG000002924_11_37 | 44956 | 46758 | + | CE4 |
| TC | MGYG000002924_11 | MGYG000002924_11_38 | 47087 | 47635 | + | 2.A.107.1.2 |
| TC | MGYG000002924_11 | MGYG000002924_11_39 | 47681 | 48544 | + | 2.A.109.2.2 |
| NULL(UNKNOWN) | MGYG000002924_11 | MGYG000002924_11_40 | 48715 | 49665 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002924_11 | MGYG000002924_11_41 | 49822 | 51117 | + | 2.A.1.24.4 |
| pfam | MGYG000002924_11 | MGYG000002924_11_42 | 51098 | 52120 | + | Patatin | DUF6363 |
| TC | MGYG000002924_11 | MGYG000002924_11_43 | 52205 | 52927 | - | 3.A.1.3.25 |
| TC | MGYG000002924_11 | MGYG000002924_11_44 | 52914 | 53648 | - | 3.A.1.3.15 |
| TC | MGYG000002924_11 | MGYG000002924_11_45 | 53738 | 54871 | - | 3.A.1.3.27 |
| TC | MGYG000002924_11 | MGYG000002924_11_46 | 55097 | 56044 | + | 3.A.1.3.2 |
Gene ID: MGYG000002924_11_37
Type: CAZyme
Location: 44956 - 46758 (+)
Type: CAZyme
Location: 44956 - 46758 (+)
Gene ID: MGYG000002924_11_38
Type: TC
Location: 47087 - 47635 (+)
Type: TC
Location: 47087 - 47635 (+)
Gene ID: MGYG000002924_11_39
Type: TC
Location: 47681 - 48544 (+)
Type: TC
Location: 47681 - 48544 (+)
Gene ID: MGYG000002924_11_40
Type:
Location: 48715 - 49665 (-)
Type:
Location: 48715 - 49665 (-)
Gene ID: MGYG000002924_11_41
Type: TC
Location: 49822 - 51117 (+)
Type: TC
Location: 49822 - 51117 (+)
Gene ID: MGYG000002924_11_42
Type: pfam
Location: 51098 - 52120 (+)
Type: pfam
Location: 51098 - 52120 (+)
Gene ID: MGYG000002924_11_43
Type: TC
Location: 52205 - 52927 (-)
Type: TC
Location: 52205 - 52927 (-)
Gene ID: MGYG000002924_11_44
Type: TC
Location: 52914 - 53648 (-)
Type: TC
Location: 52914 - 53648 (-)
Gene ID: MGYG000002924_11_45
Type: TC
Location: 53738 - 54871 (-)
Type: TC
Location: 53738 - 54871 (-)
Gene ID: MGYG000002924_11_46
Type: TC
Location: 55097 - 56044 (+)
Type: TC
Location: 55097 - 56044 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
UMGS124
Genus
UMGS124
Species
UMGS124 sp900539345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002924_11_38 | vegetarian > omnivore | 17.95050 | 0.00224 |
| MGYG000002924_11_38 | vegetarian > vegan | 17.95050 | 0.01332 |
| MGYG000002924_11_39 | vegan > omnivore | 1.42034 | 0.00000 |
| MGYG000002924_11_39 | vegetarian > omnivore | 3.20685 | 0.00224 |
| MGYG000002924_11_39 | vegetarian > vegan | 1.78651 | 0.01332 |
| MGYG000002924_11_40 | vegetarian > omnivore | 4.08866 | 0.00224 |
| MGYG000002924_11_40 | vegetarian > vegan | 18.09506 | 0.01332 |
| MGYG000002924_11_42 | vegan > omnivore | 13.82740 | 0.00000 |
| MGYG000002924_11_42 | vegetarian > omnivore | 17.72099 | 0.00224 |
| MGYG000002924_11_42 | vegetarian > vegan | 3.89359 | 0.01332 |
| MGYG000002924_11_45 | vegetarian > omnivore | 1.16049 | 0.00224 |
| MGYG000002924_11_45 | vegetarian > vegan | 2.98038 | 0.01332 |