Cluster: MGYG000002924_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002924
- CGC Family ID: CGCFAM_01301
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002924_7 | MGYG000002924_7_46 | 51837 | 56528 | - | 1.C.39.4.6 |
| peptidase | MGYG000002924_7 | MGYG000002924_7_47 | 56951 | 59932 | - | C40.UNW |
| peptidase | MGYG000002924_7 | MGYG000002924_7_48 | 60111 | 62840 | - | C82.UPA |
| CAZyme | MGYG000002924_7 | MGYG000002924_7_49 | 63093 | 66065 | + | GT111 | GT2 | GT8 |
| pfam | MGYG000002924_7 | MGYG000002924_7_50 | 66246 | 68114 | - | DUF4012 |
| CAZyme | MGYG000002924_7 | MGYG000002924_7_51 | 68328 | 69512 | - | GT4 |
| TC | MGYG000002924_7 | MGYG000002924_7_52 | 69568 | 71067 | + | 9.B.18.1.1 |
| TC | MGYG000002924_7 | MGYG000002924_7_53 | 71155 | 72564 | - | 3.A.1.103.5 |
| TC | MGYG000002924_7 | MGYG000002924_7_54 | 72574 | 73341 | - | 3.A.1.103.6 |
| CAZyme | MGYG000002924_7 | MGYG000002924_7_55 | 73675 | 76359 | + | GT2 |
| CAZyme | MGYG000002924_7 | MGYG000002924_7_56 | 76463 | 77479 | - | GT2 |
| CAZyme | MGYG000002924_7 | MGYG000002924_7_57 | 77472 | 78500 | - | GT8 |
| CAZyme | MGYG000002924_7 | MGYG000002924_7_58 | 78551 | 79705 | - | GT4 |
Gene ID: MGYG000002924_7_46
Type: TC
Location: 51837 - 56528 (-)
Type: TC
Location: 51837 - 56528 (-)
Gene ID: MGYG000002924_7_47
Type: peptidase
Location: 56951 - 59932 (-)
Type: peptidase
Location: 56951 - 59932 (-)
Gene ID: MGYG000002924_7_48
Type: peptidase
Location: 60111 - 62840 (-)
Type: peptidase
Location: 60111 - 62840 (-)
Gene ID: MGYG000002924_7_49
Type: CAZyme
Location: 63093 - 66065 (+)
Type: CAZyme
Location: 63093 - 66065 (+)
Gene ID: MGYG000002924_7_50
Type: pfam
Location: 66246 - 68114 (-)
Type: pfam
Location: 66246 - 68114 (-)
Gene ID: MGYG000002924_7_51
Type: CAZyme
Location: 68328 - 69512 (-)
Type: CAZyme
Location: 68328 - 69512 (-)
Gene ID: MGYG000002924_7_52
Type: TC
Location: 69568 - 71067 (+)
Type: TC
Location: 69568 - 71067 (+)
Gene ID: MGYG000002924_7_53
Type: TC
Location: 71155 - 72564 (-)
Type: TC
Location: 71155 - 72564 (-)
Gene ID: MGYG000002924_7_54
Type: TC
Location: 72574 - 73341 (-)
Type: TC
Location: 72574 - 73341 (-)
Gene ID: MGYG000002924_7_55
Type: CAZyme
Location: 73675 - 76359 (+)
Type: CAZyme
Location: 73675 - 76359 (+)
Gene ID: MGYG000002924_7_56
Type: CAZyme
Location: 76463 - 77479 (-)
Type: CAZyme
Location: 76463 - 77479 (-)
Gene ID: MGYG000002924_7_57
Type: CAZyme
Location: 77472 - 78500 (-)
Type: CAZyme
Location: 77472 - 78500 (-)
Gene ID: MGYG000002924_7_58
Type: CAZyme
Location: 78551 - 79705 (-)
Type: CAZyme
Location: 78551 - 79705 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
UMGS124
Genus
UMGS124
Species
UMGS124 sp900539345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002924_7_46 | vegetarian > omnivore | 4.22293 | 0.00224 |
| MGYG000002924_7_46 | vegan > omnivore | 1.13385 | 0.00000 |
| MGYG000002924_7_46 | vegetarian > vegan | 3.08908 | 0.01332 |
| MGYG000002924_7_48 | vegan > omnivore | 15.11522 | 0.00000 |
| MGYG000002924_7_48 | vegetarian > omnivore | 17.76633 | 0.00224 |
| MGYG000002924_7_48 | vegetarian > vegan | 2.65111 | 0.01332 |
| MGYG000002924_7_49 | vegetarian > omnivore | 2.84410 | 0.00224 |
| MGYG000002924_7_49 | vegetarian > vegan | 3.27632 | 0.01332 |
| MGYG000002924_7_51 | vegan > omnivore | 13.61533 | 0.00000 |
| MGYG000002924_7_51 | vegetarian > omnivore | 17.99697 | 0.00224 |
| MGYG000002924_7_51 | vegetarian > vegan | 4.38163 | 0.01332 |
| MGYG000002924_7_53 | vegetarian > vegan | 1.76023 | 0.01332 |
| MGYG000002924_7_54 | vegetarian > omnivore | 1.80392 | 0.00224 |
| MGYG000002924_7_54 | vegetarian > vegan | 1.63468 | 0.01332 |
| MGYG000002924_7_58 | vegetarian > omnivore | 17.60941 | 0.00224 |
| MGYG000002924_7_58 | vegan > omnivore | 15.45960 | 0.00000 |
| MGYG000002924_7_58 | vegetarian > vegan | 2.14981 | 0.01332 |