Cluster: MGYG000002924_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002924
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002924_5 | MGYG000002924_5_47 | 47715 | 48827 | - | GT28 |
| TC | MGYG000002924_5 | MGYG000002924_5_48 | 48824 | 50236 | - | 2.A.103.1.3 |
| pfam | MGYG000002924_5 | MGYG000002924_5_49 | 50229 | 51653 | - | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000002924_5 | MGYG000002924_5_50 | 51666 | 52688 | - | 9.B.146.1.6 |
Gene ID: MGYG000002924_5_47
Type: CAZyme
Location: 47715 - 48827 (-)
Type: CAZyme
Location: 47715 - 48827 (-)
Gene ID: MGYG000002924_5_48
Type: TC
Location: 48824 - 50236 (-)
Type: TC
Location: 48824 - 50236 (-)
Gene ID: MGYG000002924_5_49
Type: pfam
Location: 50229 - 51653 (-)
Type: pfam
Location: 50229 - 51653 (-)
Gene ID: MGYG000002924_5_50
Type: TC
Location: 51666 - 52688 (-)
Type: TC
Location: 51666 - 52688 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
UMGS124
Genus
UMGS124
Species
UMGS124 sp900539345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002924_5_47 | vegetarian > omnivore | 4.31933 | 0.00224 |
| MGYG000002924_5_47 | vegetarian > vegan | 3.32480 | 0.01332 |
| MGYG000002924_5_49 | vegan > omnivore | 1.00941 | 0.00000 |
| MGYG000002924_5_49 | vegetarian > omnivore | 3.69032 | 0.00224 |
| MGYG000002924_5_49 | vegetarian > vegan | 2.68091 | 0.01332 |
| MGYG000002924_5_50 | vegetarian > omnivore | 1.50120 | 0.00224 |