Cluster: MGYG000002919_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002919
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002919_16 | MGYG000002919_16_30 | 40677 | 43685 | + | GH2 |
| NULL(UNKNOWN) | MGYG000002919_16 | MGYG000002919_16_31 | 43689 | 44144 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002919_16 | MGYG000002919_16_32 | 44298 | 45761 | + | 2.A.3.7.4 |
| STP | MGYG000002919_16 | MGYG000002919_16_33 | 46183 | 46431 | + | PTS-HPr |
| STP | MGYG000002919_16 | MGYG000002919_16_34 | 46620 | 46862 | + | FeoA |
| TC | MGYG000002919_16 | MGYG000002919_16_35 | 46902 | 47123 | + | 9.A.8.1.6 |
| TC | MGYG000002919_16 | MGYG000002919_16_36 | 47247 | 49574 | + | 9.A.8.1.6 |
Gene ID: MGYG000002919_16_30
Type: CAZyme
Location: 40677 - 43685 (+)
Type: CAZyme
Location: 40677 - 43685 (+)
Gene ID: MGYG000002919_16_31
Type:
Location: 43689 - 44144 (+)
Type:
Location: 43689 - 44144 (+)
Gene ID: MGYG000002919_16_32
Type: TC
Location: 44298 - 45761 (+)
Type: TC
Location: 44298 - 45761 (+)
Gene ID: MGYG000002919_16_33
Type: STP
Location: 46183 - 46431 (+)
Type: STP
Location: 46183 - 46431 (+)
Gene ID: MGYG000002919_16_34
Type: STP
Location: 46620 - 46862 (+)
Type: STP
Location: 46620 - 46862 (+)
Gene ID: MGYG000002919_16_35
Type: TC
Location: 46902 - 47123 (+)
Type: TC
Location: 46902 - 47123 (+)
Gene ID: MGYG000002919_16_36
Type: TC
Location: 47247 - 49574 (+)
Type: TC
Location: 47247 - 49574 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.