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Cluster: MGYG000002918_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002918_4 MGYG000002918_4_25 25541 25984 + 4.A.6.1.16
pfam MGYG000002918_4 MGYG000002918_4_26 25984 26265 + YajC
TC MGYG000002918_4 MGYG000002918_4_27 26302 26784 + 4.A.6.1.4
TC MGYG000002918_4 MGYG000002918_4_28 26875 27675 + 4.A.6.1.4
TC MGYG000002918_4 MGYG000002918_4_29 27665 28747 + 4.A.6.1.4
TF MGYG000002918_4 MGYG000002918_4_30 28933 29664 + GntR
STP MGYG000002918_4 MGYG000002918_4_31 29779 30945 + SIS | SIS
CAZyme MGYG000002918_4 MGYG000002918_4_32 31063 32232 + CE9
Gene ID: MGYG000002918_4_25
Type: TC
Location: 25541 - 25984 (+)
Gene ID: MGYG000002918_4_26
Type: pfam
Location: 25984 - 26265 (+)
Gene ID: MGYG000002918_4_27
Type: TC
Location: 26302 - 26784 (+)
Gene ID: MGYG000002918_4_28
Type: TC
Location: 26875 - 27675 (+)
Gene ID: MGYG000002918_4_29
Type: TC
Location: 27665 - 28747 (+)
Gene ID: MGYG000002918_4_30
Type: TF
Location: 28933 - 29664 (+)
Gene ID: MGYG000002918_4_31
Type: STP
Location: 29779 - 30945 (+)
Gene ID: MGYG000002918_4_32
Type: CAZyme
Location: 31063 - 32232 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002918_4_26 vegan > omnivore 1.05462 0.00863

🧭 Explore Read Mapping of CGC

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