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Cluster: MGYG000002917_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002917_2 MGYG000002917_2_8 6293 7462 - CE9
STP MGYG000002917_2 MGYG000002917_2_9 7581 8747 - SIS | SIS
TF MGYG000002917_2 MGYG000002917_2_10 8862 9593 - GntR
TC MGYG000002917_2 MGYG000002917_2_11 9779 10861 - 4.A.6.1.4
TC MGYG000002917_2 MGYG000002917_2_12 10851 11651 - 4.A.6.1.4
TC MGYG000002917_2 MGYG000002917_2_13 11742 12224 - 4.A.6.1.4
pfam MGYG000002917_2 MGYG000002917_2_14 12261 12542 - YajC
TC MGYG000002917_2 MGYG000002917_2_15 12542 12985 - 4.A.6.1.16
Gene ID: MGYG000002917_2_8
Type: CAZyme
Location: 6293 - 7462 (-)
Gene ID: MGYG000002917_2_9
Type: STP
Location: 7581 - 8747 (-)
Gene ID: MGYG000002917_2_10
Type: TF
Location: 8862 - 9593 (-)
Gene ID: MGYG000002917_2_11
Type: TC
Location: 9779 - 10861 (-)
Gene ID: MGYG000002917_2_12
Type: TC
Location: 10851 - 11651 (-)
Gene ID: MGYG000002917_2_13
Type: TC
Location: 11742 - 12224 (-)
Gene ID: MGYG000002917_2_14
Type: pfam
Location: 12261 - 12542 (-)
Gene ID: MGYG000002917_2_15
Type: TC
Location: 12542 - 12985 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002917_2_14 vegan > omnivore 1.07046 0.00701

🧭 Explore Read Mapping of CGC

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