Cluster: MGYG000002905_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002905
- CGC Family ID: CGCFAM_00275
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002905_42 | MGYG000002905_42_3 | 3610 | 6633 | + | 1.B.14.6.1 |
| pfam | MGYG000002905_42 | MGYG000002905_42_4 | 6655 | 8118 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000002905_42 | MGYG000002905_42_5 | 8125 | 10227 | + | CBM32 | GH43_28 |
| CAZyme | MGYG000002905_42 | MGYG000002905_42_6 | 10279 | 11622 | + | GH144 |
| CAZyme | MGYG000002905_42 | MGYG000002905_42_7 | 11637 | 13919 | + | GH3 |
| NULL(UNKNOWN) | MGYG000002905_42 | MGYG000002905_42_8 | 13987 | 14295 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002905_42 | MGYG000002905_42_9 | 14428 | 15168 | + | GH172 |
Gene ID: MGYG000002905_42_3
Type: TC
Location: 3610 - 6633 (+)
Type: TC
Location: 3610 - 6633 (+)
Gene ID: MGYG000002905_42_4
Type: pfam
Location: 6655 - 8118 (+)
Type: pfam
Location: 6655 - 8118 (+)
Gene ID: MGYG000002905_42_5
Type: CAZyme
Location: 8125 - 10227 (+)
Type: CAZyme
Location: 8125 - 10227 (+)
Gene ID: MGYG000002905_42_6
Type: CAZyme
Location: 10279 - 11622 (+)
Type: CAZyme
Location: 10279 - 11622 (+)
Gene ID: MGYG000002905_42_7
Type: CAZyme
Location: 11637 - 13919 (+)
Type: CAZyme
Location: 11637 - 13919 (+)
Gene ID: MGYG000002905_42_8
Type:
Location: 13987 - 14295 (+)
Type:
Location: 13987 - 14295 (+)
Gene ID: MGYG000002905_42_9
Type: CAZyme
Location: 14428 - 15168 (+)
Type: CAZyme
Location: 14428 - 15168 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma sp900541935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.