Cluster: MGYG000002900_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002900
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002900_3 | MGYG000002900_3_18 | 22023 | 22760 | + | 2.A.102.2.5 |
| TF | MGYG000002900_3 | MGYG000002900_3_19 | 22807 | 23823 | + | LacI |
| CAZyme | MGYG000002900_3 | MGYG000002900_3_20 | 24030 | 25223 | + | GH179 |
| TC | MGYG000002900_3 | MGYG000002900_3_21 | 25296 | 26954 | + | 2.A.1.1.26 |
| pfam | MGYG000002900_3 | MGYG000002900_3_22 | 27130 | 28056 | + | AP_endonuc_2 |
| pfam | MGYG000002900_3 | MGYG000002900_3_23 | 28345 | 29490 | - | ADH_zinc_N | ADH_N | ADH_zinc_N_2 |
| TC | MGYG000002900_3 | MGYG000002900_3_24 | 30452 | 32035 | - | 2.A.1.1.26 |
Gene ID: MGYG000002900_3_18
Type: TC
Location: 22023 - 22760 (+)
Type: TC
Location: 22023 - 22760 (+)
Gene ID: MGYG000002900_3_19
Type: TF
Location: 22807 - 23823 (+)
Type: TF
Location: 22807 - 23823 (+)
Gene ID: MGYG000002900_3_20
Type: CAZyme
Location: 24030 - 25223 (+)
Type: CAZyme
Location: 24030 - 25223 (+)
Gene ID: MGYG000002900_3_21
Type: TC
Location: 25296 - 26954 (+)
Type: TC
Location: 25296 - 26954 (+)
Gene ID: MGYG000002900_3_22
Type: pfam
Location: 27130 - 28056 (+)
Type: pfam
Location: 27130 - 28056 (+)
Gene ID: MGYG000002900_3_23
Type: pfam
Location: 28345 - 29490 (-)
Type: pfam
Location: 28345 - 29490 (-)
Gene ID: MGYG000002900_3_24
Type: TC
Location: 30452 - 32035 (-)
Type: TC
Location: 30452 - 32035 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinomyces
Species
Actinomyces urogenitalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.