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Cluster: MGYG000002900_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002900_3 MGYG000002900_3_5 4297 7794 - 3.A.1.122.2
pfam MGYG000002900_3 MGYG000002900_3_6 7957 8544 - DNA_binding_1
pfam MGYG000002900_3 MGYG000002900_3_7 8597 9190 - Isochorismatase
TC MGYG000002900_3 MGYG000002900_3_8 9381 9908 + 2.A.37.1.1
CAZyme MGYG000002900_3 MGYG000002900_3_9 10040 12475 - GH3
TF MGYG000002900_3 MGYG000002900_3_10 12720 13562 - HTH_1
pfam MGYG000002900_3 MGYG000002900_3_11 13693 14562 + Aldo_ket_red
TC MGYG000002900_3 MGYG000002900_3_12 14710 15609 + 8.A.5.1.6
pfam MGYG000002900_3 MGYG000002900_3_13 15857 16195 + CMD
TC MGYG000002900_3 MGYG000002900_3_14 16416 17441 - 8.A.5.1.6
Gene ID: MGYG000002900_3_5
Type: TC
Location: 4297 - 7794 (-)
Gene ID: MGYG000002900_3_6
Type: pfam
Location: 7957 - 8544 (-)
Gene ID: MGYG000002900_3_7
Type: pfam
Location: 8597 - 9190 (-)
Gene ID: MGYG000002900_3_8
Type: TC
Location: 9381 - 9908 (+)
Gene ID: MGYG000002900_3_9
Type: CAZyme
Location: 10040 - 12475 (-)
Gene ID: MGYG000002900_3_10
Type: TF
Location: 12720 - 13562 (-)
Gene ID: MGYG000002900_3_11
Type: pfam
Location: 13693 - 14562 (+)
Gene ID: MGYG000002900_3_12
Type: TC
Location: 14710 - 15609 (+)
Gene ID: MGYG000002900_3_13
Type: pfam
Location: 15857 - 16195 (+)
Gene ID: MGYG000002900_3_14
Type: TC
Location: 16416 - 17441 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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