Cluster: MGYG000002900_CGC19
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000002900
- CGC Family ID: CGCFAM_05159
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002900_20 | MGYG000002900_20_17 | 14525 | 14929 | + | 9.B.55.1.2 |
| pfam | MGYG000002900_20 | MGYG000002900_20_18 | 15047 | 15556 | - | tRNA_edit |
| CAZyme | MGYG000002900_20 | MGYG000002900_20_19 | 15616 | 18393 | - | CBM67 | GH78 |
| sulfatase | MGYG000002900_20 | MGYG000002900_20_20 | 18577 | 20154 | + | S1_8 |
| peptidase | MGYG000002900_20 | MGYG000002900_20_21 | 20197 | 21882 | - | S09.UPW |
| CAZyme | MGYG000002900_20 | MGYG000002900_20_22 | 21997 | 23556 | - | GH43_12 |
| CAZyme | MGYG000002900_20 | MGYG000002900_20_23 | 23620 | 26535 | - | CBM67 | GH78 |
| STP | MGYG000002900_20 | MGYG000002900_20_24 | 26710 | 27387 | - | TetR_N |
| TC | MGYG000002900_20 | MGYG000002900_20_25 | 27555 | 28898 | + | 2.A.1.2.94 |
| CAZyme | MGYG000002900_20 | MGYG000002900_20_26 | 28998 | 30278 | + | GH1 |
| CAZyme | MGYG000002900_20 | MGYG000002900_20_27 | 30929 | 33133 | + | GH78 |
Gene ID: MGYG000002900_20_17
Type: TC
Location: 14525 - 14929 (+)
Type: TC
Location: 14525 - 14929 (+)
Gene ID: MGYG000002900_20_18
Type: pfam
Location: 15047 - 15556 (-)
Type: pfam
Location: 15047 - 15556 (-)
Gene ID: MGYG000002900_20_19
Type: CAZyme
Location: 15616 - 18393 (-)
Type: CAZyme
Location: 15616 - 18393 (-)
Gene ID: MGYG000002900_20_20
Type: sulfatase
Location: 18577 - 20154 (+)
Type: sulfatase
Location: 18577 - 20154 (+)
Gene ID: MGYG000002900_20_21
Type: peptidase
Location: 20197 - 21882 (-)
Type: peptidase
Location: 20197 - 21882 (-)
Gene ID: MGYG000002900_20_22
Type: CAZyme
Location: 21997 - 23556 (-)
Type: CAZyme
Location: 21997 - 23556 (-)
Gene ID: MGYG000002900_20_23
Type: CAZyme
Location: 23620 - 26535 (-)
Type: CAZyme
Location: 23620 - 26535 (-)
Gene ID: MGYG000002900_20_24
Type: STP
Location: 26710 - 27387 (-)
Type: STP
Location: 26710 - 27387 (-)
Gene ID: MGYG000002900_20_25
Type: TC
Location: 27555 - 28898 (+)
Type: TC
Location: 27555 - 28898 (+)
Gene ID: MGYG000002900_20_26
Type: CAZyme
Location: 28998 - 30278 (+)
Type: CAZyme
Location: 28998 - 30278 (+)
Gene ID: MGYG000002900_20_27
Type: CAZyme
Location: 30929 - 33133 (+)
Type: CAZyme
Location: 30929 - 33133 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinomyces
Species
Actinomyces urogenitalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.