Cluster: MGYG000002899_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002899
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002899_25 | MGYG000002899_25_15 | 14959 | 16071 | + | 9.B.146.1.6 |
| pfam | MGYG000002899_25 | MGYG000002899_25_16 | 16068 | 17507 | + | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000002899_25 | MGYG000002899_25_17 | 17510 | 18856 | + | 2.A.103.1.3 |
| CAZyme | MGYG000002899_25 | MGYG000002899_25_18 | 18846 | 19967 | + | GT28 |
Gene ID: MGYG000002899_25_15
Type: TC
Location: 14959 - 16071 (+)
Type: TC
Location: 14959 - 16071 (+)
Gene ID: MGYG000002899_25_16
Type: pfam
Location: 16068 - 17507 (+)
Type: pfam
Location: 16068 - 17507 (+)
Gene ID: MGYG000002899_25_17
Type: TC
Location: 17510 - 18856 (+)
Type: TC
Location: 17510 - 18856 (+)
Gene ID: MGYG000002899_25_18
Type: CAZyme
Location: 18846 - 19967 (+)
Type: CAZyme
Location: 18846 - 19967 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.