Cluster: MGYG000002899_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002899
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002899_12 | MGYG000002899_12_42 | 35958 | 37649 | + | 3.A.1.120.6 |
| CAZyme | MGYG000002899_12 | MGYG000002899_12_43 | 37708 | 39885 | + | GH77 |
| pfam | MGYG000002899_12 | MGYG000002899_12_44 | 39913 | 40653 | - | Hydrolase | HAD_2 |
| TC | MGYG000002899_12 | MGYG000002899_12_45 | 40666 | 40896 | - | 4.A.1.1.5 |
Gene ID: MGYG000002899_12_42
Type: TC
Location: 35958 - 37649 (+)
Type: TC
Location: 35958 - 37649 (+)
Gene ID: MGYG000002899_12_43
Type: CAZyme
Location: 37708 - 39885 (+)
Type: CAZyme
Location: 37708 - 39885 (+)
Gene ID: MGYG000002899_12_44
Type: pfam
Location: 39913 - 40653 (-)
Type: pfam
Location: 39913 - 40653 (-)
Gene ID: MGYG000002899_12_45
Type: TC
Location: 40666 - 40896 (-)
Type: TC
Location: 40666 - 40896 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.