Cluster: MGYG000002899_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002899
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002899_10 | MGYG000002899_10_3 | 2438 | 3688 | + | GH3 |
| pfam | MGYG000002899_10 | MGYG000002899_10_4 | 3992 | 7486 | - | Aldedh | Pro_dh |
| TC | MGYG000002899_10 | MGYG000002899_10_5 | 7656 | 9347 | - | 2.A.21.2.4 |
Gene ID: MGYG000002899_10_3
Type: CAZyme
Location: 2438 - 3688 (+)
Type: CAZyme
Location: 2438 - 3688 (+)
Gene ID: MGYG000002899_10_4
Type: pfam
Location: 3992 - 7486 (-)
Type: pfam
Location: 3992 - 7486 (-)
Gene ID: MGYG000002899_10_5
Type: TC
Location: 7656 - 9347 (-)
Type: TC
Location: 7656 - 9347 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.