Cluster: MGYG000002899_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002899
- CGC Family ID: CGCFAM_07700
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002899_66 | MGYG000002899_66_6 | 5262 | 6560 | - | GH16_24 |
| pfam | MGYG000002899_66 | MGYG000002899_66_7 | 6579 | 7703 | - | ROK |
| TC | MGYG000002899_66 | MGYG000002899_66_8 | 7836 | 8810 | + | 3.A.1.1.7 |
| TC | MGYG000002899_66 | MGYG000002899_66_9 | 8832 | 9617 | + | 3.A.1.1.36 |
Gene ID: MGYG000002899_66_6
Type: CAZyme
Location: 5262 - 6560 (-)
Type: CAZyme
Location: 5262 - 6560 (-)
Gene ID: MGYG000002899_66_7
Type: pfam
Location: 6579 - 7703 (-)
Type: pfam
Location: 6579 - 7703 (-)
Gene ID: MGYG000002899_66_8
Type: TC
Location: 7836 - 8810 (+)
Type: TC
Location: 7836 - 8810 (+)
Gene ID: MGYG000002899_66_9
Type: TC
Location: 8832 - 9617 (+)
Type: TC
Location: 8832 - 9617 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.