Cluster: MGYG000002899_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002899
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002899_55 | MGYG000002899_55_3 | 1312 | 1926 | + | 4.F.1.3.1 |
| pfam | MGYG000002899_55 | MGYG000002899_55_4 | 1927 | 2877 | + | Lip_A_acyltrans |
| CAZyme | MGYG000002899_55 | MGYG000002899_55_5 | 2874 | 4004 | + | GT4 |
Gene ID: MGYG000002899_55_3
Type: TC
Location: 1312 - 1926 (+)
Type: TC
Location: 1312 - 1926 (+)
Gene ID: MGYG000002899_55_4
Type: pfam
Location: 1927 - 2877 (+)
Type: pfam
Location: 1927 - 2877 (+)
Gene ID: MGYG000002899_55_5
Type: CAZyme
Location: 2874 - 4004 (+)
Type: CAZyme
Location: 2874 - 4004 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.