Cluster: MGYG000002899_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002899
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002899_34 | MGYG000002899_34_11 | 12920 | 14104 | - | GH109 |
| TF | MGYG000002899_34 | MGYG000002899_34_12 | 14349 | 15359 | + | LacI |
| TC | MGYG000002899_34 | MGYG000002899_34_13 | 15638 | 17299 | - | 2.A.1.1.26 |
Gene ID: MGYG000002899_34_11
Type: CAZyme
Location: 12920 - 14104 (-)
Type: CAZyme
Location: 12920 - 14104 (-)
Gene ID: MGYG000002899_34_12
Type: TF
Location: 14349 - 15359 (+)
Type: TF
Location: 14349 - 15359 (+)
Gene ID: MGYG000002899_34_13
Type: TC
Location: 15638 - 17299 (-)
Type: TC
Location: 15638 - 17299 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.