Cluster: MGYG000002898_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002898
- CGC Family ID: CGCFAM_00011
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002898_1 | MGYG000002898_1_269 | 276883 | 277617 | - | 3.A.1.103.1 |
| TC | MGYG000002898_1 | MGYG000002898_1_270 | 277614 | 278393 | - | 3.A.1.103.4 |
| peptidase | MGYG000002898_1 | MGYG000002898_1_271 | 278670 | 280307 | + | C26.964 |
| CAZyme | MGYG000002898_1 | MGYG000002898_1_272 | 280496 | 281656 | + | GT2 |
| CAZyme | MGYG000002898_1 | MGYG000002898_1_273 | 281699 | 282535 | - | GT8 |
| TC | MGYG000002898_1 | MGYG000002898_1_274 | 282907 | 285639 | - | 1.B.40.1.5 |
Gene ID: MGYG000002898_1_269
Type: TC
Location: 276883 - 277617 (-)
Type: TC
Location: 276883 - 277617 (-)
Gene ID: MGYG000002898_1_270
Type: TC
Location: 277614 - 278393 (-)
Type: TC
Location: 277614 - 278393 (-)
Gene ID: MGYG000002898_1_271
Type: peptidase
Location: 278670 - 280307 (+)
Type: peptidase
Location: 278670 - 280307 (+)
Gene ID: MGYG000002898_1_272
Type: CAZyme
Location: 280496 - 281656 (+)
Type: CAZyme
Location: 280496 - 281656 (+)
Gene ID: MGYG000002898_1_273
Type: CAZyme
Location: 281699 - 282535 (-)
Type: CAZyme
Location: 281699 - 282535 (-)
Gene ID: MGYG000002898_1_274
Type: TC
Location: 282907 - 285639 (-)
Type: TC
Location: 282907 - 285639 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D pittmaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.