Cluster: MGYG000002898_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002898
- CGC Family ID: CGCFAM_01193
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002898_1 | MGYG000002898_1_250 | 256727 | 257110 | + | 2.A.5.5.2 |
| TC | MGYG000002898_1 | MGYG000002898_1_251 | 257196 | 257555 | + | 2.A.5.5.2 |
| TC | MGYG000002898_1 | MGYG000002898_1_252 | 257780 | 260200 | + | 1.B.55.1.3 |
| CAZyme | MGYG000002898_1 | MGYG000002898_1_253 | 260216 | 262132 | + | CE4 | GH153 |
| CAZyme | MGYG000002898_1 | MGYG000002898_1_254 | 262141 | 263376 | + | GT2 |
Gene ID: MGYG000002898_1_250
Type: TC
Location: 256727 - 257110 (+)
Type: TC
Location: 256727 - 257110 (+)
Gene ID: MGYG000002898_1_251
Type: TC
Location: 257196 - 257555 (+)
Type: TC
Location: 257196 - 257555 (+)
Gene ID: MGYG000002898_1_252
Type: TC
Location: 257780 - 260200 (+)
Type: TC
Location: 257780 - 260200 (+)
Gene ID: MGYG000002898_1_253
Type: CAZyme
Location: 260216 - 262132 (+)
Type: CAZyme
Location: 260216 - 262132 (+)
Gene ID: MGYG000002898_1_254
Type: CAZyme
Location: 262141 - 263376 (+)
Type: CAZyme
Location: 262141 - 263376 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D pittmaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.